Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  187 bits (474), Expect = 7e-52
 Identities = 130/415 (31%), Positives = 208/415 (50%), Gaps = 31/415 (7%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           L D+K++++KP+ + +K+SD  GL+LL+ P G +LW  KYR+  KE+   +G++P VSLA
Sbjct: 3   LNDSKIRNLKPSAKPFKVSDSHGLYLLINPGGSRLWYLKYRINRKESRLGLGTYPDVSLA 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPVF 125
           +AR  R+  R L+ Q I+PAH+R         A  +  R+ E SF  VA  +    +   
Sbjct: 63  DARQQRDGIRKLLAQNINPAHQR---------AAEKVSRSPEKSFRDVALDWHKSNRTWS 113

Query: 126 AHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAW-AAIHVKGDLSAIF 184
            + + R   S +  +L P    +P++++  +    LL+  +  G    A   +  L  I 
Sbjct: 114 ENHATRLLAS-MNNHLFPVIGHLPVTELKARHFIDLLKGIEKKGLLEVAARTRQHLCNIM 172

Query: 185 EFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYR-GYPETALCLRL 243
            +AV + L+E NP  +L G++  P      A+  E++ +   ++  Y+ G   T L + L
Sbjct: 173 RYAVHQELIEHNPAANLDGIIAPPVKRHYPALQLERLPELLASIEDYKQGRELTRLAVSL 232

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQAI 291
                 R  E   A W E DF + +W  PA +             K R  H+ PLS QAI
Sbjct: 233 TLHLFIRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQAI 292

Query: 292 AVLKDLQRITGGGRYLFP--HRSGKGFTTPNRLTYAMRDMNLGR--GTTPHCWRTTFSTW 347
           A+L+ +Q I+G    +FP  H   K     N +  A+R M          H +R    + 
Sbjct: 293 AILRQIQEISGHQVLIFPGDHNPYKPM-CENTVNKALRLMGYDTKDEICGHGFRAMACSA 351

Query: 348 ANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYLSAAEHS 400
             E+G +  DA+ERQ++H+E N VRA Y +KA  LD R++++Q W+ YL     S
Sbjct: 352 LMESGLWSQDAVERQMSHLERNSVRAAYIHKAEYLDARQAMMQWWSDYLDMNRES 406