Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 419 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  197 bits (500), Expect = 6e-55
 Identities = 133/414 (32%), Positives = 210/414 (50%), Gaps = 32/414 (7%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           LTD  +++ KP D+ +KLSD  GL+LL+KP G KLW  KYR  GKE   A G++P VSLA
Sbjct: 3   LTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVSLA 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYL-AEIKPV 124
            AR  RE+AR ++  G  P  ++Q  KQ          +   ++F  +A+ ++ A I+  
Sbjct: 63  SARKLREEARTILSAGDDPGVKKQHDKQ---------AKKNGNTFEAIARQWVAANIRWS 113

Query: 125 FAHSSYRTKESRIRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAW-AAIHVKGDLSAI 183
            AH++   +   +  ++ P    + ++D+    +   L   +  G    A  ++   + I
Sbjct: 114 EAHAAKVLRS--LELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVI 171

Query: 184 FEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCLRL 243
             +AV  GL+ +NP   L G +  P      A+  E++ +  + + GY G   T L ++L
Sbjct: 172 MRYAVQEGLIASNPANDLCGAITPPPKNHYPALPLERLPELLERIEGYSGRLLTRLAVQL 231

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQAI 291
             L   R  E   A W E D ++A+W  PA +             K +  H+ PLS QA+
Sbjct: 232 NLLIFIRSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAV 291

Query: 292 AVLKDLQRITGGGRYLFP--HRSGKGFTTPNRLTYAMRDM--NLGRGTTPHCWRTTFSTW 347
            VLK L+ ++G G  LFP  H + K   + N +  A+R M  +       H +RT   + 
Sbjct: 292 TVLKQLKLLSGNGDLLFPGDHDARKPM-SENTINKALRTMGYDTQADICGHGFRTIACSA 350

Query: 348 ANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYLSAAEH 399
             E+G +  DA+ERQ++H E N VRA Y +KA  LD+R  ++Q W+ YL   +H
Sbjct: 351 LIESGRWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDVCQH 404