Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 422 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  199 bits (507), Expect = 1e-55
 Identities = 133/411 (32%), Positives = 215/411 (52%), Gaps = 29/411 (7%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           LTD   ++ KP ++ +KL+D  GL+LLV P G K W  KYR  GKE+  A G++P +SLA
Sbjct: 3   LTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFDGKESRIAFGAYPLISLA 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPVF 125
           +AR  R++ R L+ +GIHP  +R++ K++  +AL        ++F KVA+ +   I    
Sbjct: 63  KAREKRDEVRLLLSEGIHPTEKREEEKEQAQDAL--------NTFEKVARDWHRNISQNR 114

Query: 126 AHSSYRTKESR-IRKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAW-AAIHVKGDLSAI 183
              ++  +  R + + + P      ++D+  K +   L+  + +G    A  ++  ++ I
Sbjct: 115 WSQTHAGRVWRDMERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRITDI 174

Query: 184 FEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALCLRL 243
             +AV   L+E NP   L G +  P +  + A+  +++  F   +  Y+G   T L L+L
Sbjct: 175 MRYAVQNDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLARIERYKGRALTRLALKL 234

Query: 244 IALTACRPGEAADAEWEEFDFEDAVWRRPAAK------------MKARREHVSPLSAQAI 291
                 R  E   A W E DF+ A+W  P  +             K R EH+ PLS QA+
Sbjct: 235 TLCVFIRSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQAL 294

Query: 292 AVLKDLQRITGGGRYLFP--HRSGKGFTTPNRLTYAMRDMNLGRGT--TPHCWRTTFSTW 347
           A+L++++ I+G    +FP  HR  K   + N +  A+R M     T    H +RT   + 
Sbjct: 295 ALLEEIKAISGVHELIFPGDHRPTKPM-SENTINSALRTMGYDTTTEVCGHGFRTMACSA 353

Query: 348 ANENG-FRPDAIERQLAHVESNKVRATY-NKALLLDQRRSLLQAWAGYLSA 396
             E+G +  DA+ERQ++H E N VRA Y +KA  L++R+ +LQ WA YL A
Sbjct: 354 LVESGQWSRDAVERQMSHQERNGVRAAYIHKAEHLEERKLMLQWWADYLDA 404