Pairwise Alignments

Query, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

Subject, 394 a.a., Int from Escherichia coli BL21

 Score =  213 bits (542), Expect = 8e-60
 Identities = 137/397 (34%), Positives = 197/397 (49%), Gaps = 17/397 (4%)

Query: 6   LTDAKVKSVKPADRDWKLSDGGGLFLLVKPAGGKLWRWKYRLQGKENLFAIGSFPQVSLA 65
           LTD KVK+ KP D+ +KL+DGGG++LL+   G K WR KYR  GKE + +IG +P V+LA
Sbjct: 3   LTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLA 62

Query: 66  EARTAREKARALVKQGIHPAHERQQVKQRNLEALAERKRAQESSFAKVAQAYLAEIKPVF 125
           +AR  R +AR L+  G  P            EA  E K AQ+ S     +A   E     
Sbjct: 63  DAREKRSEARKLLAAGGDPG-----------EAKKEEKIAQQMSLQNTFEAIAREWHQSK 111

Query: 126 AHS-SYRTKESRI---RKYLSPKFDGMPMSDIGVKQIRPLLEECKAHGAWAAIH-VKGDL 180
           A   S R ++  I    K + P     P+++I   ++   L + +  GA   +  V+   
Sbjct: 112 ADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRC 171

Query: 181 SAIFEFAVVRGLVEANPIPSLRGLLRVPASESKAAMTREQIQKFYQALRGYRGYPETALC 240
             +F +A+V G  + NP P L   L  P       +T  ++  F   L GY G   T   
Sbjct: 172 GEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTA 231

Query: 241 LRLIALTACRPGEAADAEWEEFDFEDAVWRRPAAKMKARREHVSPLSAQAIAVLKDLQRI 300
            ++I LT  R  E   A WE+ DFE  +W  PA  MK +R H+ PLS Q I + K L+ I
Sbjct: 232 TQIIMLTGVRTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPI 291

Query: 301 TGGGRYLFPHRSG-KGFTTPNRLTYAMRDMNLGRGTTPHCWRTTFSTWANENGFRPDAIE 359
           +     +F  R+  +   +   +   +  +      T H +R T ST  +E GF    IE
Sbjct: 292 SKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIE 351

Query: 360 RQLAHVESNKVRATYNKALLLDQRRSLLQAWAGYLSA 396
            QLAHV+ N +R TYN AL LD RR ++Q +A Y+ +
Sbjct: 352 MQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYIDS 388