Pairwise Alignments

Query, 420 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

Subject, 423 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  297 bits (760), Expect = 5e-85
 Identities = 164/433 (37%), Positives = 251/433 (57%), Gaps = 29/433 (6%)

Query: 1   MRPHHKSLCHILCGGAVVIA----TGPASA-AFVEDSKASIDLRNFYMNRDFRSGD-GQS 54
           M P   S   +  GG + +A    T  A A  F++D+K S++LRNFY+NR+F   D  QS
Sbjct: 1   MTPRTPSSVALFAGGCMTLASLGFTASAQAEGFIDDAKLSLNLRNFYINRNFVDPDYAQS 60

Query: 55  KAEEWAQGFMLKMESGYTEGPIGFGVDAIGLLGVKLDSSPDRVGTGIL-----QSDREAP 109
           K EEW Q F+L  +SGYT GP+GFGVDA+GLL VKLD      GTG+L       DR  P
Sbjct: 61  KGEEWTQSFILNFQSGYTPGPVGFGVDALGLLAVKLDGGGGTYGTGLLPVHGAPGDRHPP 120

Query: 110 NRAQDDYGSAGITAKAKLSATTLHVGTLQPILPVVMRNDSRLLPQTYRGAWLQSKEIDGL 169
               DD+    + AKAKLS T + VG     LP++  +D R LPQT++G  + S+EI+GL
Sbjct: 121 ----DDFARVAVAAKAKLSETEVRVGEWMVALPILRSDDGRSLPQTFQGGMITSREINGL 176

Query: 170 TLDLGKLDRVNQRNSSDNEEMTAFNGGRRNIQFGRQTSSDEFLFAGARYAWSPELSTSYY 229
            L  G++ + + R+    ++M         +Q     +SD F F G  Y    +     +
Sbjct: 177 ALYGGQMRQNSPRDDGSMDDMF--------LQGFAGVTSDRFNFVGGEYELGAKTKVGAW 228

Query: 230 YGGLDGIYKEHNFGLVHVLPLGDKQSFKSDLRYVHQTDDGGSNV---DADAFGAMFTYKL 286
           +  L+ IY+++ F  +H  P+G+  +  ++L Y    ++G + V   D   +  +F  ++
Sbjct: 229 HARLEDIYQQNYFQFLHTQPIGEGMALTANLGYFTGKEEGSARVGDLDNKTYSGLFGLQV 288

Query: 287 GGHAFGAGYQQLNGDTGFAYIAG-SDNSLVNLVQINDFGNEDERSWQVRYDYDFAAMGIP 345
           GG+ F  G Q+++GD G+  + G S  +L N    + + N +ERSWQ+R+DY+F  MG+P
Sbjct: 289 GGNTFYVGLQKVSGDNGWMRVNGTSGGTLANDSFNSAYDNRNERSWQLRHDYNFTGMGVP 348

Query: 346 GLSLMTRYLSGDNVDRGAGASEGKTWERNTDIAYVFQSGPLKNLGLRLRNATTRSNF-GS 404
           GL++M RY+SGD ++ G G  +GK W R +++AY  QSGP KNL ++ RN++ R ++  +
Sbjct: 349 GLTIMNRYISGDRIEAG-GVDDGKEWGRESELAYTVQSGPFKNLNVKWRNSSIRRDYSAN 407

Query: 405 DLDENRFIVSYSL 417
           + DENR I +Y L
Sbjct: 408 EFDENRLIFNYPL 420