Pairwise Alignments

Query, 420 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  241 bits (615), Expect = 3e-68
 Identities = 151/425 (35%), Positives = 216/425 (50%), Gaps = 43/425 (10%)

Query: 28  FVEDSKASIDLRNFYMNRD--------FRSGDGQSK--AEEWAQGFMLKMESGYTEGPIG 77
           F+E S  ++  RNFY NRD        + SG G +   +E WA   + K  SG+T+G +G
Sbjct: 32  FIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIISKFNSGFTQGTVG 91

Query: 78  FGVDAIGLLGVKLDSSPDRVGT----GILQSDREAPNRAQDDYGSAGITAKAKLSATTLH 133
           FGVDA  ++G+KLD+   R G      +L  D +    A+D+Y   G  AK +L  T + 
Sbjct: 92  FGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKG--EARDEYTKVGGAAKVRLFDTIVK 149

Query: 134 VGTLQPILPVVMRNDSRLLPQTYRGAWLQSKEIDGLTLDLGKLDRVNQRNSSD-NEEMTA 192
           VG + P  PVV   DSRLLP+++RG  +++  I GLTL  G+L  ++Q  SS+ N+    
Sbjct: 150 VGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQPVSSNLNDNFVT 209

Query: 193 FNGGRRNIQFGRQTSSDEFLFAGARYAWSPELSTSYYYGGLDGIYKEHNFGLVHVLPLGD 252
           F GG  N        S    + G  Y+ +   + S Y   L  ++ ++  G   V PL D
Sbjct: 210 FYGGPVN--------SPWIGYGGGDYSINDNWTVSVYASQLKDVWNQYYAGTSVVYPLSD 261

Query: 253 KQSFKSDLRYVHQTDDGGSNV---DADAFGAMFTYKLGGHAFGAGYQQLNGDTGFAYIAG 309
             +      Y    D+G   +   D + + A    + G H     +Q+ NGD  F Y+  
Sbjct: 262 DLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDDFDYLRQ 321

Query: 310 SDNSLV-NLVQINDFGNEDERSWQVRYDYDFAAMGIPGLSLMTRYLSGDNV--------- 359
           SD+  V N +Q +DF +  ERSW +RYD +F + GIPGL+ MTRY  G            
Sbjct: 322 SDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYARGSGADYSNANQFY 381

Query: 360 ----DRGAGASEGKTWERNTDIAYVFQSGPLKNLGLRLRNATTRSN-FGSDLDENRFIVS 414
               D G      K WER+ ++ YV Q+GP K+L  RLR ATTR+  F SDLDE R I+ 
Sbjct: 382 MRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRATAFESDLDETRVIIE 441

Query: 415 YSLPL 419
           Y L +
Sbjct: 442 YPLSI 446