Pairwise Alignments

Query, 373 a.a., hemolysin secretion protein D from Azospirillum brasilense Sp245

Subject, 360 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  143 bits (360), Expect = 8e-39
 Identities = 105/365 (28%), Positives = 177/365 (48%), Gaps = 12/365 (3%)

Query: 8   VAGGVLTAALGAAAVVTLSMHTQEASAVSDPRQEAPIVRLAAAVPVAGSERGFTGVVGAR 67
           + G + T   G   +  LS   +E +   +P+Q + +           +    TG + AR
Sbjct: 1   MGGRIFTCIFGLGLLTLLSGCGEEKA---EPKQHSRVFVQTVQSADFAAAVTLTGDIQAR 57

Query: 68  VQSNLGFRVPGKIIERLATVGQPVKAGQPLMRIDETDLRLALTAKRNAVAAARATAVQTQ 127
           VQ++L FRV GKII+R+  VG  V A Q L ++D  DL+  + + +  V A +A   QT 
Sbjct: 58  VQTDLSFRVGGKIIQRMVDVGDRVTAKQVLAKLDPKDLQTNVDSAQAQVVAEQARVKQTA 117

Query: 128 ADERRYASLVNDGWATRQRHEQAKAALDTARAQLASAEADARVAENEATYSVLVADSDGT 187
           A   R   L+  G+ +R  ++ A+AAL ++++ LA+A+A    A  +  Y+ L+AD+ G 
Sbjct: 118 AAFVRQEKLLPKGYTSRSEYDSAQAALRSSQSALAAAQAQLANAREQLGYTSLIADAPGV 177

Query: 188 VVETLGEPGQVVAAGQTVVRIAQAGPREAVVALPET--IRPQIGSPAEASLYGADGQRYG 245
           +     E GQVV A   +  +A+ G R+AV  + E+  + P   +P   SL      +  
Sbjct: 178 ITARQAEVGQVVQATVPIFSLARDGERDAVFNVYESLLVEPPPDAPITVSLLDNPSIKAV 237

Query: 246 AHLRQLSDAADAQTRTYEARYVLDGDAASAPLGATVTIRLAGWTAGRTGQADMQVPLGAV 305
             +R+++ A  A T T + +  L        LG+ V+      TA    +A +++P  A+
Sbjct: 238 GKVREVTPAVAANTGTVQVKIALQALPKGMELGSVVSA-----TANGPAKASIELPWAAL 292

Query: 306 LDDGRKTGVWTLDRASSTVRFQTVRLVR-VSGETAVISGLGLGDPVVSLGAHLLQDGVRV 364
             D  +  VW +D      +   V + R ++G+  +  GL  G+ VV  G  LL  G+RV
Sbjct: 293 TKDLSEPAVWLID-GDGKAQLHKVTVARYLTGKVIIGDGLKGGEKVVVAGGQLLHPGMRV 351

Query: 365 RTAAE 369
             A +
Sbjct: 352 EIAQQ 356