Pairwise Alignments

Query, 373 a.a., hemolysin secretion protein D from Azospirillum brasilense Sp245

Subject, 366 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  169 bits (428), Expect = 1e-46
 Identities = 110/322 (34%), Positives = 171/322 (53%), Gaps = 9/322 (2%)

Query: 52  PVAGSERGFTGVVGARVQSNLGFRVPGKIIERLATVGQPVKAGQPLMRIDETDLRLALTA 111
           P + S   + G V AR + +L FR+ GK+ +RL   G+ VKA Q L  +D  D+RL L A
Sbjct: 41  PSSQSMDSYPGEVRARYEPDLAFRIGGKVSKRLVEEGERVKANQALAELDPQDVRLQLEA 100

Query: 112 KRNAVAAARATAVQTQADERRYASLVNDGWATRQRHEQAKAALDTARAQLASAEADARVA 171
            R  VA A A     +A+  RY +L++    +R +++ ++       A+L   +A+  VA
Sbjct: 101 TRAQVAGAEANLSLVRAERDRYKTLMDRQMVSRSQYDNSENLYRAGVARLKQIKAEFDVA 160

Query: 172 ENEATYSVLVADSDGTVVETLGEPGQVVAAGQTVVRIAQAGPREAVVALPET--IRPQIG 229
            N+A Y+VL A  DG V + + E GQVV+AGQTV  +A  G RE +++LPE    R +IG
Sbjct: 161 SNQAGYAVLRAPQDGVVAKRVVEVGQVVSAGQTVFTLATDGEREVLISLPEQGFGRFKIG 220

Query: 230 SPAEASLYGADGQRYGAHLRQLSDAADAQTRTYEARYVLDGDAASAPLGATVTIRLAGWT 289
            P    L+    QR+   +R+LS AAD ++RT+ AR    G    A LG +  + +    
Sbjct: 221 QPVSVELWSQPDQRFTGRIRELSPAADPKSRTFAARVAFTGGKVPAELGQSARVFIQ--- 277

Query: 290 AGRTGQADMQVPLGAVLDDGRKTGVWTLDRASSTVRFQTVRLVRVSGETA-VISGLGLGD 348
               G   + VPL A+  +   + VW + +  +T++   VR+     +T  V+ GL   D
Sbjct: 278 --VDGDIPLSVPLSALSAENGASYVWRV-QPDNTLKRTPVRIGAFGEKTVPVLEGLSPTD 334

Query: 349 PVVSLGAHLLQDGVRVRTAAES 370
            V++ G H+L +G +VR    S
Sbjct: 335 WVIAAGVHVLHEGQQVRPVDRS 356