Pairwise Alignments

Query, 390 a.a., integrase from Azospirillum brasilense Sp245

Subject, 404 a.a., integrase from Pseudomonas simiae WCS417

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 32/331 (9%)

Query: 24  EELKGFGLRIYPSGRKMYLAQFRAGGRLRRVNIGPHGVLTPDVARTEAMKHLSDVRRGSD 83
           E+  G  L + P+GRK +L +F+  GR R + +G    ++   AR  A    S +  G D
Sbjct: 19  EDGDGLRLVVKPTGRKSWLLRFQLAGRRREMGLGSFPEVSLKKARQAASAKRSQLSDGID 78

Query: 84  PASERDRRKASPTMKE---FGKRFLEDHVASHCKPT--------TRAEYKRSIELFINPK 132
           P + RD  +A+    E     K+   + +A+  +           R  + R +EL+    
Sbjct: 79  PLAARDLERAAQREAERVSEAKKLKFETLATEYRDAHGAMWSEKWRKGWLRKLELYAFAH 138

Query: 133 LGSHRIIDVSRAEVVELHQSLKATPYQ-ANRTLGVLSVMFTVAHTWGVRTDGVNPC-W-- 188
           +G     D+   EV+++ Q + AT  + A+   G +  +   A    +R +G NP  W  
Sbjct: 139 IGKLSAEDIGTPEVLKVLQPIWATKTRTADEVRGQIEQVLDAAKARNLR-EGENPARWRG 197

Query: 189 -------KVKRYKEVKRERY--LTPDELARLGKVLRKSTSEPEAVNCIHLLLLTGCRLSE 239
                  + ++ K  KRE +  L   ++  L   LR +++ P       LL++T  R   
Sbjct: 198 HLDNLLSRAEKKKARKREHFEALRWQDVPDLMIKLRANSTPPSW--AAQLLIMTSARAHM 255

Query: 240 IQTLKWDYVDLNAGVLRLPDSKTG---AKLVTIGKAAVEVLKDIPKVTDNPYVITGRIEG 296
           ++  +WD  DL AG   LP  +     A ++ + +  V ++K IP+   + ++  G  +G
Sbjct: 256 VRFARWDEFDLEAGTWSLPGERMKMRVAFVIPLAEEVVNLVKSIPRDEGSAFLFPG--QG 313

Query: 297 QHLTDMQRPWRRLRKRAKLEDVRIHDLRHSF 327
           +         R L      E +  H  R SF
Sbjct: 314 KTGVMHANAVRTLLHGIGYEHITRHGFRSSF 344