Pairwise Alignments

Query, 390 a.a., integrase from Azospirillum brasilense Sp245

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 34/200 (17%)

Query: 193 YKEVKRERYLTPD-----ELARLGKVLRKSTSEP------------EAVN-----CIHLL 230
           Y+ + RE+ +  D     ++ +LG+ L KS SE             EA+       + +L
Sbjct: 84  YRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVL 143

Query: 231 LLTGCRLSEIQTLKWDYVDLNAGVLRLPDSKTGAKLVTIGKAAVEVLKDIPKVTDNPY-- 288
              G R++E+ +L  + V+L  GVLR+    +  +LV +G+ A+  ++   +   +    
Sbjct: 144 YACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARSELLG 203

Query: 289 -----VITGRIEGQHLTDMQRPWRRLRKRAKLEDV----RIHDLRHSFASDALQLGEDLP 339
                V+   + G+ +T  Q  W R++ +AK+  +      H LRH+FA+  L  G DL 
Sbjct: 204 GRPSDVLFPSLRGEQMT-RQTFWHRIKHQAKVAGIGKALSPHTLRHAFATHLLNHGADLR 262

Query: 340 MIGRLLGHTQVQTTARYAHL 359
           ++  LLGH+ + TT  Y H+
Sbjct: 263 VVQMLLGHSDLSTTQIYTHV 282