Pairwise Alignments

Query, 390 a.a., integrase from Azospirillum brasilense Sp245

Subject, 394 a.a., integrase from Pseudomonas simiae WCS417

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 83/374 (22%), Positives = 151/374 (40%), Gaps = 49/374 (13%)

Query: 4   ITKRSVDAAVPGEQEFFLWDEELKGFGLRIYPSGRKMYLAQFRAGGRLRRVNIGPHGVLT 63
           +T  +   A P E  + + D    G  L + PSG K +  +F   G+  R++IG +    
Sbjct: 3   LTDTAAKQAKPRENGYTIPDS--LGLSLYVAPSGVKSWHFRFTWLGKQVRISIGTYPETG 60

Query: 64  PDVARTEAMKHLSDVRRGSDPASERDRRKASPTMK--EFGKRFLEDHVA---SHCKPTTR 118
              AR    +   D+  G DP   R  +KA       +  +R  ++ +A       P T 
Sbjct: 61  LKEARARRDEAREDIANGVDPRDSRREKKAGMIAAGGQTFRRVYDEWLAFRKGSISPGTY 120

Query: 119 AEYKRSIELFINPKLGSHRIIDVSRAEVVELHQSL--KATPYQANRTLGVLSVMFTVAHT 176
                ++ L + P LG  +I  + RA+V+ L + +  + +   A +    +S +F+ A  
Sbjct: 121 RVISNAMALDVLPTLGDRQIDAIKRADVIALIRRVEKRGSVATAVKVRQRMSQVFSYAIA 180

Query: 177 WGVRTDGVNPCWKV----KRYKEVKRERYLTPDELARLGKVLRKSTSEPEAVNCIHLLLL 232
            GV     NP  ++    ++  + K   +L   E+ R+   +R   S  +    + L++ 
Sbjct: 181 TGVIE--ANPTAEMHAVTEKMGQHKPHPFLPFSEMPRIMAAIRDCASGQQLKAALMLMIY 238

Query: 233 TGCRLSEIQTLKWDYVDLNAGVLRLPDSKTGAK---LVTIGKAAVEVLKDIPKVT-DNPY 288
           T  R  E++  +W  +DL+A +   P +K   +    V +   A+ +L+ +  +T D  Y
Sbjct: 239 TASRPGEVRHAEWSEIDLDAAIWTTPAAKMKMRRDHAVPLSTQAIAILESMLPITGDKRY 298

Query: 289 VITGR---------------IEGQHLTDMQRPWRRLRKRAKLEDVRIHDLRHSFASDALQ 333
           V   R               ++   LT +Q P               H  RH F+++   
Sbjct: 299 VFINRNSTTAPIGTNYANNVMDSCGLTGIQSP---------------HGFRHLFSTEMNG 343

Query: 334 LGEDLPMIGRLLGH 347
            G +   I R L H
Sbjct: 344 RGYNRDWIERQLAH 357