Pairwise Alignments

Query, 1598 a.a., hypothetical protein from Azospirillum brasilense Sp245

Subject, 339 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score = 96.7 bits (239), Expect = 4e-24
 Identities = 91/342 (26%), Positives = 142/342 (41%), Gaps = 52/342 (15%)

Query: 1240 IDIGALLQPIPGDDPAGEDLRHGPEFDALTEARRMDDDLDQGIWQTTVKKADWKGVVQQS 1299
            +D+  LL  +    P GED+ +  +F  L    +   +   G      +  +W+ + QQS
Sbjct: 1    MDVPLLLTAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDAILPAEPPEWRSIQQQS 60

Query: 1300 SDLLTTRTKDLQVAAWLVQALGHLHGPAGLAPGLLLVHGLVEDFWEGLYPRL---DDGDP 1356
             DLL  R+KDL++  +L+Q+   L G AGLA  L L+  L+ D+W  L+PRL   DD DP
Sbjct: 61   LDLLA-RSKDLRITHFLLQSALALQGVAGLAEALTLIDALLRDYWADLHPRLDADDDNDP 119

Query: 1357 EPRLAPLVWLDSQLSRDLMATAITQPGPHTDETHRFQDWQNAQRLRKLATRDPRAFHAAV 1416
              R+  L  L    +  L+  +I                     L +  T  P    AA+
Sbjct: 120  TVRINALTGLTCDTNIRLLRESI---------------------LTRSRTFGPVTLRAAL 158

Query: 1417 D--------DGEVTVEQILAAQDRTPPDFYQTQHGHLRDTVTAVRTLAAEL-----DAVA 1463
            +        D ++  +Q+ AA   + P+  Q      RD + A R     +     D V 
Sbjct: 159  NASGLLNFPDEQLGAQQLNAAFLDSDPEQLQA----TRDALIAARAACEAIEQQVNDQVG 214

Query: 1464 GRAAPGFSQLLKTLESLIQFHREALAKRGIDPDGAAAVTEEAEGGEGATIDASAEIIPAA 1523
                   S L + L+  +Q   +A+      P  A +   EA   + A    S ++  A 
Sbjct: 215  SAQGVDLSALKQPLKQALQILNQAV------PGTAGSSEPEAVSDDNA---PSVDVAAAP 265

Query: 1524 AFARPGGP-RTRQEAYAMLHQIADFLAREEPHSPTSYLVRRA 1564
            A  RP G   +R +    L +I  +  R EP SP   L+ RA
Sbjct: 266  AAPRPAGDIASRDDVLRSLDKILAYYTRHEPSSPLPVLLNRA 307