Pairwise Alignments

Query, 366 a.a., ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  323 bits (829), Expect = 3e-93
 Identities = 165/354 (46%), Positives = 227/354 (64%), Gaps = 1/354 (0%)

Query: 13  AAIAIAGPALAQAKKPVNIYIWNDYLGESTLADFTKATGYDTKVDLYDSLELLEQKVLVG 72
           AA  +      QA   V++Y W DY+G++TLADF  ++G     D++DS E LE K+L G
Sbjct: 10  AAFTLLFATTTQAAPTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNETLEGKLLAG 69

Query: 73  KSGYDVIVPTAEPTLSRMIQAKVVAPLDKAKIPNLKNVDPKVLKLLENSDPGNKFAVPYL 132
           ++GYDV+VP+    L+R  QA    PLD++K+PN +++DPK+LK LE +DPGN++AVPYL
Sbjct: 70  RTGYDVVVPSNH-FLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPGNQYAVPYL 128

Query: 133 GGTVGIAIIPEKIKAVAPDVPLDSWDLIFKPEVAKKVAACGITVMDSAIDVIPSVLNYLG 192
            GT GI    +K+KA      +DSW ++F+PE  KK+  CG+  MDS  ++ P+VLNYLG
Sbjct: 129 WGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAVLNYLG 188

Query: 193 LDPNSEKKEDLDKVEKTLLAVRPYIKQFVTGQNINILAGGDACVVMAYNGDAIQGAARAE 252
           +DP SEK  D  K E  LL +RPYI  F + + ++ LA GD C+   Y+GD  Q A RA 
Sbjct: 189 MDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGDVFQAANRAV 248

Query: 253 EAKNGVKVEYITPKEGVQVWWDTLAIPADAPNKEGAHAYINFILDPANIAAVSNTVSYAN 312
           EAKNGVKV Y  PKEG  +W+D LAIP DA N E A A+IN++LDP  IA VS TV YAN
Sbjct: 249 EAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAKVSATVGYAN 308

Query: 313 AVPASLASVDEGVKTNPAVFLPENSSLKLFALKSIKQTTDRARTRVWTKVKTGK 366
           A P + A +D  +  NP ++ P+    KL+   +      R  TR W+K+K+ +
Sbjct: 309 ANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRSWSKIKSNR 362