Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum brasilense Sp245

Subject, 355 a.a., putative membrane fusion protein (MFP) of efflux pump from Escherichia coli BL21

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 14/307 (4%)

Query: 3   WIAETLAAALSVL-------GLGGGYAVPLAHGYAEGEYLRIAAPVAGTLDTLAVTRGGR 55
           W+   LA A  V        G+  G+AV  ++G  E   + IA+ +AG +DT+ V  G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAV--SNGRIEATEVDIASKIAGRIDTILVKEGQF 68

Query: 56  VEAGAPLFALDRTSARAERDRLAAALAQARAQLADLRT--GRRPDELAVVAAQRAQAEAA 113
           V  G  L  +D    + +R    A + +A++ +A  +    +R  E     +   Q +A 
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 114 LRYSEAELARQQTLVARKVSSDDRLDAARASRDGDRARLEELTAQLAVSN--LPARPDQI 171
           L        R ++L  R   S  +LD  RA+ +  RA LE   AQ++ S   + A    I
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI 188

Query: 172 RAAEDAVAQAEAALAQADRRLAEMAPPAPEAALVEDTLFNPGEWVPAGAPVVSLLPPEKR 231
             A+  V  A+A   +    + +    AP    V+  +  PGE + AG  V++++     
Sbjct: 189 IQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDV 248

Query: 232 KLVVFVPEPLMARVRPGDRVTVRCDGCPP-GLTARVTYVAPRVEYTPPVIYSVGSREKLV 290
            +  F+P      ++ G    +  D  P   + A +++VA   ++TP  + +   R KL+
Sbjct: 249 YMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLM 308

Query: 291 FRVEARL 297
           FRV+AR+
Sbjct: 309 FRVKARI 315