Pairwise Alignments

Query, 1370 a.a., macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. from Acidovorax sp. GW101-3H11

Subject, 1300 a.a., ATP-dependent helicase (RefSeq) from Escherichia coli BW25113

 Score = 1035 bits (2677), Expect = 0.0
 Identities = 592/1354 (43%), Positives = 830/1354 (61%), Gaps = 141/1354 (10%)

Query: 32   ITFPDSLPVSGKREEIMAAITKHQVIIVCGETGSGKTTQLPKIALALGRGKCNAKPGQKG 91
            IT+PD+LPVS K+++I+ AI  HQV+IV GETGSGKTTQLPKI + LGRG        KG
Sbjct: 71   ITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGI-------KG 123

Query: 92   QLIGHTQPRRIAASSVAKRIAEELNTPLGDVVGFKVRFQDRLSRDASVKLMTDGILLAET 151
             LIGHTQPRR+AA +VA RIAEEL T  G  +G+KVRF D +S +  VKLMTDGILLAE 
Sbjct: 124  -LIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEI 182

Query: 152  QTDPLLKAYDTIIIDEAHERSLNIDFLLGYIRQILPRRPDLKVIVTSATIDADRFAKHFE 211
            Q D LL  YDTIIIDEAHERSLNIDFLLGY++++LPRRPDLK+I+TSATID +RF++HF 
Sbjct: 183  QQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFN 242

Query: 212  SAKGPAPVIMVSGRTFPVEQRWRPFEETRDHGLNE---AIADGVDELWAGNAAGDILIFL 268
            +A    P+I VSGRT+PVE R+RP  E  D    +   AI D VDEL +  + GDILIF+
Sbjct: 243  NA----PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDEL-SQESHGDILIFM 297

Query: 269  PGEREIREAADHLRKHLSHQPVMRNAEVLPLFARLSQAEQDRIFDGHTGRRIVLATNVAE 328
             GEREIR+ AD L K       +R+ E+LPL+ARLS +EQ+R+F  H+GRRIVLATNVAE
Sbjct: 298  SGEREIRDTADALNKLN-----LRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAE 352

Query: 329  TSLTVPGVRYVIDAGTARVKRYSFRSKVEQLLVEPVSQAAANQRAGRCGRVANGICIRLY 388
            TSLTVPG++YVID GTAR+ RYS+R+KV++L +EP+SQA+ANQR GRCGRV+ GICIRLY
Sbjct: 353  TSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLY 412

Query: 389  DEADFNSRPRFTDPEILRSSLAGVILRMKSLHLGDVGQFPFIEAPSGRAIADGYQLLSEL 448
             E DF SRP FTDPEILR++LA VIL+M +L LGD+  FPF+EAP  R I DG +LL EL
Sbjct: 413  SEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEEL 472

Query: 449  GAVD-----DANELTPMGVELSKLPLDPRVGRMILEARERRALDEVLVIASALSVQDVRD 503
            GA+       A +LTP+G +LS+LP+DPR+ RM+LEA++   + E ++I SALS+QD R+
Sbjct: 473  GAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRE 532

Query: 504  RPLEAQQQADQAHAKFDDEKSEFSGYLKLWKWINEARGGAPSLPSARAQKAMAQQKAPSQ 563
            RP++ QQ +D+ H +F D++S+F  ++ LW ++ E                  QQKA   
Sbjct: 533  RPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGE------------------QQKA--- 571

Query: 564  AHLPVAQRSAAAAPVPAVASVAAPAPTHKLSNRQYEQLLRQNFISIRRLREWRDIHTQLL 623
                                         LS+  + +L R ++++  R+REW+DI+TQL 
Sbjct: 572  -----------------------------LSSNAFRRLCRTDYLNYLRVREWQDIYTQLR 602

Query: 624  TVVTEHKWQINTQPASYEQIHLSMLSGLLGNIGVKSDEEDWYLGARGIKFYKHPGAHLSK 683
             VV E    +N++PA Y +IH+++L+GLL +IG+K  ++  Y GAR  +F   PG+ L K
Sbjct: 603  QVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFK 662

Query: 684  KPGRWIVAAELVETTRLFGRGIAAIEPQWLEQVGGHLLKKQMLDPHWEKKAAQVTALERA 743
            KP +W++ AELVET+RL+GR  A I+P+W+E V  HL+K+   +PHWE+    V A E+ 
Sbjct: 663  KPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKV 722

Query: 744  TLYGIVVYNNRRVDFGKVDPQGAREVFLREALVGGEWETRLPFLAANQKLIAKVEELEHK 803
            T+YG+ +   R+V++ ++DP   RE+F+R ALV G+W+TR  F   N KL A+VEELEHK
Sbjct: 723  TVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHK 782

Query: 804  SRRQDVLVDDELIYAFYDQQVPQDVCSGTTFERWYKDASRANPELLKLTRDELMRHEAAG 863
            SRR+D+LVDDE ++ FYDQ++  DV S   F+ W+K  SR  P+LL   +  L++  A  
Sbjct: 783  SRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEK 842

Query: 864  ITTSAFPKTVRLGGVDCTATYLHEPGDARDGITVTIPLFVLNQVSDERCEWLVPGMLKDK 923
            I+   +P     G +    +Y  EPG   DG+TV IPL +LNQV +   EW +PG+ ++ 
Sbjct: 843  ISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRREL 902

Query: 924  IQALLKSLHQRPRSRFVPLPESAARLAELFNAPERFGTGSLTDALLKQVRDETSLDVKRA 983
            + AL+KSL +  R  FVP P      AE F    +     L D+L +++R  T + V R 
Sbjct: 903  VIALIKSLPKPVRRNFVPAP----NYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDRE 958

Query: 984  DFKLDMLSPHLFMNFRVVDEHGRQLGHGRNLGALKAEWGAKARGAFQALAGLKLGGAAAE 1043
            D+  D +  HL + FRVVD+  ++L  GR+L  LK     K +    A+A          
Sbjct: 959  DWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVAD--------- 1009

Query: 1044 EQKSESKMPSARDGKAQAAIKSGANSPAQPAQPSPAAQATPSAPAGQRFTSWTFGELPEL 1103
                        DG  Q+ +                               W+FG+LPE 
Sbjct: 1010 ------------DGIEQSGLH-----------------------------IWSFGQLPES 1028

Query: 1104 MEIKKAGQTLIGFPALIDGGDAVSIEVFDEPEVAAAKHRAGLRRLFALQIKDALKYLEKN 1163
             E K+    +  +PAL+D  D+V+I++FD P         GLRRL  L I   +KYL + 
Sbjct: 1029 YEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK 1088

Query: 1164 IPDLQKMAVAYMPLGTQEELRTQIIDVALDRAFLLD----PLPTDEYAFKRRVEEGRGRL 1219
            +P+  K+ + + P G   EL    I   +D+  L+D    P+ T+E  F    E+ R  L
Sbjct: 1089 LPNKAKLGLYFNPYGKVLELIDDCISCGVDK--LIDANGGPVWTEE-GFAALHEKVRAEL 1145

Query: 1220 TLIANEVARLAGTILIEYAAAARKIKDTKNAPDA--TADALQQLQRLVPKQFIAQAPWGQ 1277
                 ++A+    IL       +++K   +   A   +D   Q+  LV + F+    + +
Sbjct: 1146 NDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKR 1205

Query: 1278 LAHFPRYLKAITLRLDKVRADPARDAAKLAELRPQEQRYWRLVAERKGA--VDARMQELR 1335
            L    RYL+AI  RL+K+  DP RD A++ ++   +Q + + + +   A   D  ++E+R
Sbjct: 1206 LGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIR 1265

Query: 1336 WLLEELRVSFFAQELRTPQPVSVKRLDKLWAQVN 1369
            W++EELRVS+FAQ+L TP P+S KR+ +   Q++
Sbjct: 1266 WMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS 1299