Pairwise Alignments

Query, 298 a.a., ABC transporter for Glycerol, permease component 1 (from data) from Acidovorax sp. GW101-3H11

Subject, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  387 bits (995), Expect = e-112
 Identities = 187/279 (67%), Positives = 227/279 (81%)

Query: 6   KPVNQKAWFLILPVIICVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVMRDEEL 65
           K  N KAW+L+LPV + VAFSA++P+MTVVNYSVQDI     R FVG +W+  V+RD  L
Sbjct: 4   KVSNNKAWWLVLPVFLLVAFSAVVPMMTVVNYSVQDIFDQSSRYFVGADWYRQVLRDPAL 63

Query: 66  HAALWRQLTFSLAVLAVEIPLGILLALSMPAQGWKSSAVLVVVALSLLIPWNVVGTIWQI 125
           H AL RQ  +S  VL +EIPLGI +AL+MP +G  +S  L+V+A+ LLIPWNVVGTIWQI
Sbjct: 64  HDALLRQFIYSACVLLIEIPLGIGIALAMPTKGRMASVCLIVMAIPLLIPWNVVGTIWQI 123

Query: 126 YGRADIGLMGRMLQEMGIEYSYTGNATQAWLTVLLMDVWHWTPLVALLAFAGLRSIPDAY 185
           +GRADIGL+G  L ++G+ Y+Y G+   AWLTVL+MDVWHWT LVALL ++GLR+IPD Y
Sbjct: 124 FGRADIGLLGASLAKLGVSYNYAGDPFDAWLTVLVMDVWHWTSLVALLCYSGLRAIPDVY 183

Query: 186 YQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTFL 245
           YQAARID AS +AVFR+IQLPK++ VL+IA++LRFMDSFMIYTEPFVLTGGGPGNATTFL
Sbjct: 184 YQAARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGPGNATTFL 243

Query: 246 SQYLTTKAVGQFDLGPAAAFSLIYFFIILLLCFILYNWM 284
           SQ LT  AVGQFDLGPAAAFSL+YF IILL+ ++ Y  M
Sbjct: 244 SQTLTRMAVGQFDLGPAAAFSLVYFLIILLVSWLFYTAM 282