Pairwise Alignments

Query, 348 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Acidovorax sp. GW101-3H11

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  297 bits (760), Expect = 3e-85
 Identities = 144/314 (45%), Positives = 215/314 (68%), Gaps = 1/314 (0%)

Query: 13  SLLEVKNLVVEFPGRRGTLRALDDISFSIAPGEILGVVGESGAGKSLTGAAIIGLLEPPG 72
           ++LE+K L  E     G +  +DDI+ S+A GE++G+VGESG+GKS+TG +I+GLL+ P 
Sbjct: 3   AMLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPV 62

Query: 73  RVASGQILLEGQRIDNLSNEEMRHIRGRRIGAIFQDPLTSLNPLYTVGRQLTETILAHLP 132
           ++  G+IL +G+ + + S +E+R IRG RI  IFQDP+++LNP+  +  Q+ E + AH  
Sbjct: 63  QMTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHEN 122

Query: 133 VTPAEARQRAIALLKDTGIPAAEERIDHYPHQFSGGMRQRVVIALALAAEPKLIVADEPT 192
           V+   AR+RA   L   GIP+ EER+  YPHQFSGGMRQRV IA+AL   P +I+ADEPT
Sbjct: 123 VSKQVARERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADEPT 182

Query: 193 TALDVSIQAQIITLLKNICKSRGAAVMLITHDMGVIAETCDRVAVLYAGRVAEIGPVHDV 252
           TALDV+IQAQI+++++ + + +G A++ +THD+ V+A   ++++V+YAGR+ E G   D+
Sbjct: 183 TALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTADL 242

Query: 253 INKPSHPYTSGLMASIPDMTMDRERLNQIDGAMPRLNAIPKGCAYNPRCPQTFDRCMTER 312
           + +P HPYT+GL+AS+P      ERL QI G  P +  +PKGCA++PRC    + C+   
Sbjct: 243 LRRPLHPYTNGLIASLPAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICLNS- 301

Query: 313 PDLMPAGSTRAACW 326
           P L P       C+
Sbjct: 302 PALEPTEGRLLRCF 315