Pairwise Alignments

Query, 323 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Acidovorax sp. GW101-3H11

Subject, 322 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (422), Expect = 4e-46
 Identities = 97/307 (31%), Positives = 170/307 (55%), Gaps = 2/307 (0%)

Query: 1   MQLTRLVVGLSLALGFVATAAAQTTMRISISTAQNSHQGIAIDTFAKEVEKRTSGRYKVQ 60
           M+L R +  L++ L  ++T AA+      +  + +     A+   ++ +++R+ G+YK++
Sbjct: 1   MKLQRHLFALAVGLLALSTQAAELRSA-DVHNSDDYPTVAAVRHMSQLLDQRSGGKYKIK 59

Query: 61  TFYNGALGGERESIEAVQLGTQELAFSSTGPIPNFVPETKILDVPFLFRDKAHARAVLDG 120
            F   ALG E+E+++ V++G  ++   +   +    P++ +  +PFLFR   H RAVLDG
Sbjct: 60  VFNKSALGSEKETLDQVKIGALDMNRVNISSLNAICPKSLVPTMPFLFRSTEHMRAVLDG 119

Query: 121 PIGQEMLTKFDSKGFKALAWAENGFRHMTNSKRSVNTPEDLKGLKMRTMENPVHIAAYKG 180
           PIG+E+L   + +G   LA+ ++G R +  +K+ V +  D+KG+K+R  ++ + +A    
Sbjct: 120 PIGEEILKGCEHQGLVGLAFYDSGARSIY-AKKPVRSLADVKGMKIRVQQSDLWVAVATA 178

Query: 181 FGIITTPMAFPEVFTALQQGTVDGQENPLPVIISAKFDQVQKHLTLTGHVYSPAIFVMNK 240
            G   TPMA  EV+T L+ G +D  EN  P     K  +  K  + T H  +P + V++K
Sbjct: 179 MGANATPMATAEVYTGLKTGVIDAAENNEPSYEGFKHYEAVKVYSYTQHSMAPEMLVISK 238

Query: 241 GSFDKLSAADKQAFIDAAKEGTKANRARVDEDDAKGVADLRAKGMTVVDNPDKSKFVAAL 300
             FDK+S AD+  F  AAKE     R + DE  AK +  +   G  +V + +K++F  A+
Sbjct: 239 AVFDKMSPADQALFRAAAKESVTFQRQKWDEQTAKAIDIVTKAGSEMVKDVNKAEFQTAM 298

Query: 301 APVNAEF 307
            PV  +F
Sbjct: 299 KPVYDKF 305