Pairwise Alignments

Query, 452 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Acidovorax sp. GW101-3H11

Subject, 434 a.a., NADH ubiquinone oxidoreductase chain F from Agrobacterium fabrum C58

 Score =  414 bits (1065), Expect = e-120
 Identities = 207/407 (50%), Positives = 279/407 (68%), Gaps = 10/407 (2%)

Query: 39  SIKDYEARGGYAALRKILGTDGGEPLTQDQVIATVKESGLRGRGGAGFPTGLKWSFMPRS 98
           S+K   ARG +   ++I+         +D +I  +K SGLRGRGGAGFPTGLKWSFMP+ 
Sbjct: 19  SLKGVMARGHWDGTKQIIEKG------RDWIINEMKASGLRGRGGAGFPTGLKWSFMPKE 72

Query: 99  FPGQK-YLVCNSDEGEPGTCKDRDILQFNPHIVIEGMIIAAYAMGISVGYNYIHGEIFQT 157
             G+  YLV N+DE EPGTCKDR+IL+ +PH +IEG +IA +AMG    Y Y+ GE  + 
Sbjct: 73  NDGRPHYLVVNADESEPGTCKDREILRNDPHTLIEGCVIAGFAMGAHTAYIYVRGEYMRE 132

Query: 158 YDRFEAALEEARAAGYLGDKILGSNFSFQLHAAHGFGAYICGEETALLESLEGKKGQPRF 217
            +  +AA++E   AG LG K   + + + ++  HG GAYICGEETALLESLEGKKGQPR 
Sbjct: 133 REALQAAIDECYDAGLLG-KNNKNGWDYDIYVHHGAGAYICGEETALLESLEGKKGQPRL 191

Query: 218 KPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGAAYLECGKPNNGGTKIFSVSGDVEKP 277
           KPPFPA+ GLYG PTT+NN E+ A  P I+R G + +   G+PNN GTK+F VSG VE+P
Sbjct: 192 KPPFPANMGLYGCPTTVNNVESIAVAPTILRRGASWFSSIGRPNNVGTKLFMVSGHVERP 251

Query: 278 GNYEVPLGTPFAKLLEL-AGGVRKG-RQLKAVIPGGSSAPVLPASIIMECTMDYDSIAKA 335
             +E  LG  F +L+E   GG+R G   L  VIPGG+S P++    + +  MD+D + + 
Sbjct: 252 CTFEDALGLSFRELIEHHCGGIRGGWDNLLGVIPGGASCPIVRGEDMKDAIMDFDGMREV 311

Query: 336 GSMLGSGAVIVMDDSRSMVESLLRLSYFYSHESCGQCTPCREGTGWMWRVIDRIQHGQGR 395
            S  G+G +IVMD S  +++++ R++ F+ HESCGQCTPCREGTGWMWRV++R+  G  +
Sbjct: 312 KSSFGTGGMIVMDKSTDVIKAIARIAAFFKHESCGQCTPCREGTGWMWRVLERMVKGNAQ 371

Query: 396 DGDLNLLNSVADNIQGRTICALGDAAAMPVRAMIKHFRPEFEALIRQ 442
             ++++L  V   I+G TICALGDAAA PV+A+I++FRPE E  I Q
Sbjct: 372 KREIDMLFEVTKQIEGHTICALGDAAAWPVQALIRNFRPEIEKRIDQ 418