Pairwise Alignments

Query, 512 a.a., putative lipid II flippase MurJ from Xanthobacter sp. DMC5

Subject, 525 a.a., lipid II flippase MurJ from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 4e-34
 Identities = 148/522 (28%), Positives = 220/522 (42%), Gaps = 42/522 (8%)

Query: 3   LLARTSIVSAATLVSRVLGFARDAATAAVLGVGPVADALAAAMALPLLARRLLAEGAFNL 62
           LL    IVSA TL+SRVLG  RD   A ++G G  AD    A  +P   RRL AEGAF+ 
Sbjct: 10  LLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQ 69

Query: 63  AFIPALA--RTSGAAGSRDEEAGRLAG-----ATLLLLCGLLLVFAAVVAVFMPQVIGLM 115
           AF+P L     SG      +   R +G      T++ L G +L   AV A+F        
Sbjct: 70  AFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIG-VLGSGAVTALFGAGWFLDW 128

Query: 116 APGFEAGGQRADVAILCGRVVVLYIPLAGLAAIFGGIANAAHRVLLPALAPAAANVTVLA 175
             G  A G + ++A L  ++   Y+      A+ G I N   +  + +  P   NV ++ 
Sbjct: 129 LNGGPAAG-KFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVFLNVMMIL 187

Query: 176 VIGVLLAKGLMESDTAAFAIAAAQVGAGCAQFGIMRLAARGCPAQPLF-----RVLTVRD 230
               L     +E      AI     G     F +  L   G   +P +      V+ +R 
Sbjct: 188 CAWYLSPN--LEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGVVKIRT 245

Query: 231 LRAALGVLRAASPALLFAGLSQLRFII--VVAAVSATPGAAAALNYAQRLMDLPLGLVGA 288
           L           PAL    +SQ+  +    VA+   T G+ + L Y+ RL++ PLGL G 
Sbjct: 246 LMI---------PALFGVSVSQINLLFDSFVASFLQT-GSISWLYYSDRLLEFPLGLFGI 295

Query: 289 SAGAVLVPALLRR-------GRAEAADDAGRAVLAALAFALPAAVGLAVLAEPIVVTLFQ 341
           +   V++PAL R+       G A   D   R V       +PA +GL VLA+P+++ LF 
Sbjct: 296 AIATVILPALSRKHVDAHSDGFAHTMDWGIRMV---TFLGIPAMLGLMVLAKPMLMVLFM 352

Query: 342 RGSFDSEDARFTAALLGVLSLSLPAQGLERILSAAASTSGQIKAAERIALGSLLLCMVAA 401
           RG F   D    +  L   S  L +  L ++L+    +    K   R  + +++  +V  
Sbjct: 353 RGEFTPSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLN 412

Query: 402 AGLGTVGGPLIAAGAVALSAVASILALGGVLIASGALRFSAPVLLSAAGLAAASLAMGGG 461
           A      G +  A A ++SA  ++  L   L   G    +   +   A LA A   M G 
Sbjct: 413 AIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLAMAGAVMTGA 472

Query: 462 V---GVLAATWPVPGGTLAGILRLVGLVASGGVIYGAGALVV 500
           +       ATW +  G     L L GL+  G   Y A  L++
Sbjct: 473 LLWQLDTMATW-LSWGISQRALTLTGLIGLGVASYLAILLLL 513