Pairwise Alignments

Query, 349 a.a., Geranylgeranyl diphosphate synthase from Xanthobacter sp. DMC5

Subject, 295 a.a., farnesyl-diphosphate synthase from Pseudomonas syringae pv. syringae B728a

 Score =  136 bits (343), Expect = 6e-37
 Identities = 104/258 (40%), Positives = 132/258 (51%), Gaps = 11/258 (4%)

Query: 83  LHAAMRHILLAPGKRLRPLLVMAAAMQLDASEHAVLDFGCALEMIHASSLIIDDLPCMDD 142
           L+ AMR+ ++  GKR+RPLL  AA   L           CA+E+IHA SL+ DDLP MDD
Sbjct: 31  LYQAMRYSVMNGGKRVRPLLAYAACEALGGVAEDANGAACAVELIHAYSLVHDDLPAMDD 90

Query: 143 AMVRRAQPTTHVKYGEDVAVLAAVALLSRSLGVAGAAPGTS--DHVRLDAVCILSKAVGS 200
             +RR QPTTH  + E  A+LA   L S +     A   TS     RL  V  L+ A G 
Sbjct: 91  DDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVTALATAAGP 150

Query: 201 LGLCGGQYDDLRPSPGRSL--AATEDVNRRKTGVLFSAAVEIAGRAAA-ADEAQAGHLRA 257
            G+ GGQ  DL  S G  L  AA E ++R KTG L  A+V +   A+  AD+ +   L+ 
Sbjct: 151 AGMVGGQAIDL-GSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGHADQPRLDALQV 209

Query: 258 LAGHVGSAYQILDDILDNSGSAAALGKDVGKD--ANKATVIASLGAPRARKLLSEHLAGA 315
            A  +G A+Q+ DDILD     A LGK  G D   +K T  A LG   A+    E    A
Sbjct: 210 YARAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLEAAKHYALELRDQA 269

Query: 316 LAASKELGPNKEGQQPLR 333
           L A   L P     +PLR
Sbjct: 270 LQA---LSPFDAAAEPLR 284