Pairwise Alignments

Query, 724 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 700 a.a., competence protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 95.9 bits (237), Expect = 6e-24
 Identities = 100/375 (26%), Positives = 166/375 (44%), Gaps = 39/375 (10%)

Query: 163 VGSHVTQLAQLLPPSGPAMPGAHDFGRAPWFQGIGAIGY-GLGRPKAAAPRDPPLSVRLA 221
           +G  +   A++ PP+        D+ R     GI   GY   G+    +P     S+R  
Sbjct: 157 IGDELLVSARIAPPANGGNFDEFDYARYLMRHGISGTGYVASGKWALWSP-----SIRYT 211

Query: 222 MALDGVRQSLSDRIRASLSGVPAEVAVALVAGDRSGIPHAVEESMRVSGLSHILSISGLH 281
            A+    + ++   +    G    V  AL  G+++ +  ++ ES  VSG SH+L++SGLH
Sbjct: 212 -AMFCQEKVINLYRKLGFEGDELAVLSALTVGEKTDLSDSIRESYSVSGASHVLALSGLH 270

Query: 282 MALVAGTLFALARGVLALVPGLALSWP----IKSSAALIALAGSAFYLVLSGNDVPAQRS 337
           + L+   LF L +        L   W      +S   L+ L   AF+  LS + V   RS
Sbjct: 271 IGLLYALLFLLLKP-------LTRKWQAGRYFRSVLLLVLLWSFAFFTGLSPSVV---RS 320

Query: 338 FVMTGLVLAGVLVGRPSLSLRSVGVAAVVVLSLTPEAALDPGTQMSFAATLALVAAYERL 397
             M  ++    L GR SL+L ++   A V+L + P    D G Q+SF A L+++   + +
Sbjct: 321 VSMFSVLAIAELFGRQSLTLNTLAATAWVMLFVNPAWLFDVGFQLSFLAVLSILMIQKPV 380

Query: 398 QPLRAIPRPDGIAGAVVSWVAVLVAGTALTSLVAGLATAPYGIFHFQRVAPYGLLANLAA 457
             L  +P        V S +   V G    S+ A + TAP  + +F R + + LL NL  
Sbjct: 381 YQL--LP--------VKSRIGKYVWGLMSVSIAAQIGTAPLVMLYFSRFSTHFLLTNLVV 430

Query: 458 MPAVSFLVMPAGLAGVLLMPFGWDHLAWPVMGRGIEIMTAVSD----WVGTLPGADIRAA 513
           +P V+ + + A +  +LL P         VM   +  +  V +    WV  LP A +   
Sbjct: 431 IPLVT-VTLYAAVLMLLLTPLPAVQF---VMAGAVRFLLKVLNDFVRWVEQLPYASLDGI 486

Query: 514 FIGAGTLLWLSLALL 528
           ++    +L + + LL
Sbjct: 487 WLYRLEVLGIYIFLL 501