Pairwise Alignments

Query, 496 a.a., Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B from Xanthobacter sp. DMC5

Subject, 469 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB from Methanococcus maripaludis S2

 Score =  274 bits (701), Expect = 4e-78
 Identities = 178/483 (36%), Positives = 263/483 (54%), Gaps = 27/483 (5%)

Query: 20  DWEVVIGMEVHAQVASNAKLFSGASTAFGG-EPNDHVSLVDAAMPGMLPVI-NKECVAQA 77
           D  +  G+E+H QV +N+KLF    T +   EPN ++  V    PG  P+  NK+ +  A
Sbjct: 4   DLSMKCGLEIHVQVDTNSKLFCQCPTNYKDVEPNTNICPVCIGHPGAKPMPPNKKAIDVA 63

Query: 78  VRTGLGLKAE--INLHSVFDRKNYFYPDLPQGYQISQYKQPVVGEGEVIVDLPDGESFTV 135
           +     L  E  I+    F RK+Y YPDLP GYQ +      +GE         G    V
Sbjct: 64  IMVAKMLDCEMVIDKDIYFQRKHYNYPDLPSGYQKTSVP---IGE--------HGTFLGV 112

Query: 136 GIERLHLEQDAGKSIHDLSPTLSFVDLNRSGVALMEIVSRPDLRSAEEAKAYVTKLRTIL 195
           GI  +HLE+D G+      P L  VD NRSG  L+EIV+ PD++S EEA+ ++ +L  + 
Sbjct: 113 GITEVHLEEDPGQ----YKPDLGTVDYNRSGTPLIEIVTDPDMKSPEEAREFLRQLMRLF 168

Query: 196 RYLGTCDGDMEKGNLRADVNVSVRRPGDELGTRCEIKNVNSIRFIGQAVEAEARRQIEIL 255
           RY+G   G+   G +RAD N+S++  G + G R E+KNVNSIR + + ++ E  RQ  +L
Sbjct: 169 RYIGHLRGE---GTMRADTNISIKYNGIQ-GNRVEVKNVNSIRGVYKVLKYELIRQKNVL 224

Query: 256 EDGGTIAQETRLFDPTKGETRSMRSKEEAHDYRYFPDPDLLPLDIKAEWVEALKANLPEL 315
             GG I  ETR F  ++  T+ MRSKE A DYRY PDPDL P+ +   WVE ++A +PE 
Sbjct: 225 RRGGEIKMETRAFMESQMITKGMRSKETADDYRYIPDPDLQPIVLNNNWVEKVEAQMPET 284

Query: 316 PDEKKARFIAEYGLSPYDAGVLVAERDTADYFEQVV-EGGGAKRDGKAAANFVINELFGR 374
           P  K+ RF+ +YG+   DA VLV++ + AD FE+VV E G  K     A  ++ NEL   
Sbjct: 285 PMNKEKRFVEQYGIKEDDAKVLVSDLELADVFEKVVAELGNDKNGISLAVTWIRNELKRV 344

Query: 375 LNKEGKDITSSPVSPQQIGTILDLIGEGTISSKIAKDLFEIVFTEGGD--PRVVVEARGM 432
           L     +   + + P+ +  +++ I + TIS KI K + E +    G+  P+ ++   G+
Sbjct: 345 LVYNKIEFFETNLKPEHMVELINSIKDKTISQKIGKTIIEQMVEHKGEKTPKELITEMGL 404

Query: 433 KQVTDTGAIEKVVDEIIAANPDKVAQVQA-KPTMLGWFVGQAMKASGGKANPQALNDILK 491
             + DT  +EK  +E I  +   V   ++     L   VGQ MK + G+A P  +  ILK
Sbjct: 405 TVIEDTSELEKACEEAIKNSEKAVEDYKSGNQRALNSVVGQVMKLTRGRAEPGTVVKILK 464

Query: 492 AKL 494
            K+
Sbjct: 465 KKI 467