Pairwise Alignments

Query, 390 a.a., putative MFS-type transporter YcaD from Xanthobacter sp. DMC5

Subject, 384 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 21/327 (6%)

Query: 61  AAMHAVGVLVTALILPRMVALLGPRRLILLSIAVSAVALAAFPIMPAIWLWFVLRLFLGM 120
           A++   G+L  AL+    V  LG R+  +  +++  +++   P++P   +W + RL  G+
Sbjct: 50  ASVFYAGLLAGALVAEPFVNRLGHRKAFVWCLSLLQLSIVVMPLLPYASVWLLARLVAGI 109

Query: 121 AAEALFVTSETWINALSTENTRARSMAAYTAAMSVGLALGPLILSLVGTEGALPYLLGAG 180
           A   +FV  E+W+     E  RA+ +  Y  ++  G ALG + +  +G  GA+P++    
Sbjct: 110 AVAGIFVVVESWL-LHGDEQGRAKRLGIYMVSLYGGTALGQMAIGQLGVAGAVPFI---- 164

Query: 181 AALVAALFVASPRVIAPHFDEPTISNPVRFVRLAPLALS-ATMLNAAIETAGLSFLALYA 239
            A+   L +AS  ++    D+P+              LS A M+   +  +GL+  A+Y 
Sbjct: 165 -AITTLLLIASIVLMYVDSDQPSTQQASSLSLRQIFKLSKAAMIGCLV--SGLTLGAIYG 221

Query: 240 V------GLGWAEEHATRLMSVMMVGAILLQLPIGWLGDTMDRRTLVILLAVISAVGAAI 293
           +        G +      LM+++++G + +Q  + WL   + R   + L  ++    AAI
Sbjct: 222 LMPVELANRGISHTDLGNLMALVILGGMAVQPLVPWLSKFLGRTLQMALFCLLGT--AAI 279

Query: 294 WPLALGNAVATYAL-LFIWGGAFVGIYTIMITLVGSRFKGGDLVGIYAVSGLFWGLGALV 352
                 +++    + LFI G A   +Y I I L   +     +V    V  L + +G++V
Sbjct: 280 TLTVFDDSLLVLGVSLFILGMATFALYPIAINLGCDKLDASYIVSATQVMLLSYSVGSVV 339

Query: 353 GPLGAGFAMQVHPHGLA--LFATLACT 377
           GP+ A   MQ   HGL   LFA L  T
Sbjct: 340 GPVLADCFMQ-DRHGLMAYLFAILLAT 365



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 19/200 (9%)

Query: 4   DSIEPATAALPEASTLVARG------AVIATAMVFGLTYSLTAPLIAFDLAARGLGETVI 57
           DS +P+T    +AS+L  R       A +   +V GLT      L+  +LA RG+  T +
Sbjct: 181 DSDQPSTQ---QASSLSLRQIFKLSKAAMIGCLVSGLTLGAIYGLMPVELANRGISHTDL 237

Query: 58  GANAAMHAVGVLVTALILPRMVALLGPRRLILLSIAVSAVALAAFPIMPAIWLWFVLRLF 117
           G   A+  +G +    ++P +   LG    + L   +   A+       ++ +  V    
Sbjct: 238 GNLMALVILGGMAVQPLVPWLSKFLGRTLQMALFCLLGTAAITLTVFDDSLLVLGVSLFI 297

Query: 118 LGMAAEALFVTSETWINALSTENTRARSMAAYTAAM----SVGLALGPLILS--LVGTEG 171
           LGMA  AL+  +   IN L  +   A  + + T  M    SVG  +GP++    +    G
Sbjct: 298 LGMATFALYPIA---IN-LGCDKLDASYIVSATQVMLLSYSVGSVVGPVLADCFMQDRHG 353

Query: 172 ALPYLLGAGAALVAALFVAS 191
            + YL     A    + + S
Sbjct: 354 LMAYLFAILLATCLYMLIKS 373