Pairwise Alignments

Query, 552 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  609 bits (1571), Expect = e-179
 Identities = 325/545 (59%), Positives = 405/545 (74%), Gaps = 16/545 (2%)

Query: 13  VSPSTLRTLFLSFLAVLMAGLVASVPARAQSQPDISGIIAKFGNDSYSDTTDAVAALATS 72
           + P+ L  LFL          VA  P   +++  +  ++   G    S+  + +AALA +
Sbjct: 4   IIPTVLAALFL---------FVAMAPG-LRAEEGLRDLVNALGEAKLSEMDEHIAALAKT 53

Query: 73  GSPQAAAVVEALAAGNLLYDPATKAVFIRTPSG----MVDPATGAIVGSAP-ANLTPVRA 127
           G P+  A++EAL  G L    A   V +   SG    + DP +G   G AP A L+ +R 
Sbjct: 54  GKPEVVAILEALGEGELYARKADGQVLLTKESGSNLTLTDPISGDSAGEAPKAALSKIRV 113

Query: 128 NNRVRRALDAAAGALTLLNADPAKRLDAAAAVFKSRDAAALPTVEAAIAKETVPAVKAAL 187
           NN VRRA+  A G+LTLL+ D  +RL AA +V +S DA AL  +E A+A E   AV+A L
Sbjct: 114 NNSVRRAVRTALGSLTLLSPDRNQRLRAAQSVLQSPDADALGVIENALAAEKDGAVRAVL 173

Query: 188 AQARAAILIGKADAPEPDRRAAIQLIAARGDQESISLLRSLPANSPPALKAAAEAGITKA 247
            QARA +L+  +D P  +++ A++L+   G +E++ +L +   ++  +LK   EA +   
Sbjct: 174 EQARATMLL-LSDRPVEEKKEAVRLLEENGGREALPILSAALGSADESLKPDIEAALASI 232

Query: 248 EESLKFWAVVQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQE 307
           E++  FW   QN+WYGLSLGSVLLLAAIGLAITFGVMG+INMAHGEMVMLGAYTTF+VQ+
Sbjct: 233 EQAQAFWNAGQNIWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQD 292

Query: 308 LIRQKAPYLFDWSLTIALPLAFLFTALVGILIERTVIRFLYGRPLETLLATWGVSLILQQ 367
           ++R   P+LF+WSL IALPLAFL T  VG+ +ER VIRFLYGRPLETLLATWG+SLILQQ
Sbjct: 293 VVRTSFPHLFEWSLAIALPLAFLVTGAVGLALERGVIRFLYGRPLETLLATWGISLILQQ 352

Query: 368 AVRSVFGPTNQEVGAPSWMSGAFQIGQLSITYNRLWIICFALIVFFTLLLVLRRTPLGLY 427
            VR++FGPTN+EVG PSWMSGAF++G L+IT+NRLWII FAL VF  LL +L++TP+GL 
Sbjct: 353 TVRTIFGPTNREVGNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQ 412

Query: 428 VRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM 487
           +RAVTQNRRMA++MGIRT  +DALTF LGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM
Sbjct: 413 MRAVTQNRRMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM 472

Query: 488 VVVFGGVGNLWGTLVGAFTLGVANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKG 547
           VVVFGGVGNLWGTLVGAF+LG+ NK LEP+AGAVLGKIL+LV IILFIQKRPRGLFALKG
Sbjct: 473 VVVFGGVGNLWGTLVGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKG 532

Query: 548 RAVES 552
           RAVE+
Sbjct: 533 RAVEA 537