Pairwise Alignments

Query, 552 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 343 a.a., branched-chain amino acid transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  137 bits (344), Expect = 9e-37
 Identities = 98/288 (34%), Positives = 149/288 (51%), Gaps = 12/288 (4%)

Query: 263 GLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQELIRQ--KAPYLFDWS 320
           GL++G ++ L A GL + FG+M VIN  HG  V +GA+    V   +     AP L    
Sbjct: 53  GLAMGMMIFLMASGLTLVFGLMDVINFGHGAFVSVGAFIGISVLLTLGHLTNAPSLGLNL 112

Query: 321 LTI--ALPLAFLFTALVGILIERTVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQ 378
           L I  A+  A   TA++G   ER +++ +YG  L  +L T G  +I +Q +  ++GP   
Sbjct: 113 LAILAAVLAAMAATAVMGWAFERVIVKPVYGNHLSQILVTMGGLIIAEQLIIVLWGPEEI 172

Query: 379 EVGAPSWMSGAFQIGQLSITYNRLWIICFALIVFFTLLLVLRRTPLGLYVRAVTQNRRMA 438
               P  + GA   G  +I   RL  +   L VF  +  VLRRT +GL VRA  QN  M 
Sbjct: 173 YFTRPEALKGALTFGDAAIEKYRLVTVGVGLAVFAAMRFVLRRTKIGLIVRAGVQNGEMV 232

Query: 439 AAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNV-SPNLGQGYIIDSFMVVVFGGVGNL 497
           AA+G R   +    F  GS +AG+ GV       V + ++G   +I  F+VV+ GG+G++
Sbjct: 233 AALGYRLRLVFIGVFIAGSALAGLGGVMWGLYQEVITAHMGNQAMILIFIVVIIGGLGSV 292

Query: 498 WGTLVGAFTLGVANK---LLEPFAGAVLGKILLLVFIILFIQKRPRGL 542
            G  +GA  +G+       +EP   A++  I L+V I+++   RP G+
Sbjct: 293 EGCFIGALLVGLLQNYIAFVEPKL-ALVSNIALMVAILMW---RPMGM 336