Pairwise Alignments

Query, 182 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 1/154 (0%)

Query: 8   LSVLGVFSLLSLLAIGGGTAVLPEMKALTIDAHHWLTDSQFRDIYSLGQVAPGPNMLMV- 66
           L++   F  L  ++ GG  A +   +   ++   W+++ ++    +L Q  PGP    V 
Sbjct: 2   LTIFRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVG 61

Query: 67  IVIGYHVAGTPGALLAFTGFFLPASVLALGSSRLWNHFDGSPWRLALQMALAPIVVGLMA 126
             IGYH  G  GA  AF GF LP+ ++ L  + L +H   +P    +   L  + + ++A
Sbjct: 62  FAIGYHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVA 121

Query: 127 AGTVAVARTAITGTETTLIAVAVFVLVYFGPKII 160
              + + R       T  + V   V +   P +I
Sbjct: 122 DACLTMYRNFCQQRLTAGLCVLTAVAITLAPGLI 155



 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 10/125 (8%)

Query: 8   LSVLGVFSLLSLLAIGGGTAVLPEMKALTIDAHHWLTDSQFRDIYSLGQVAPGPNMLMVI 67
           + + G F     L  GGG  VLP ++    D+   L+  QF   Y+  Q  PGP   +  
Sbjct: 210 VELFGHFFQAGSLVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPMFTLAT 266

Query: 68  VIGYHVAGTP-----GALLAFTGFFLPASVLALGSSRLWNHFDGSPWRLALQMALAPIVV 122
            +GY +  TP     GAL+A    FLP  +L LG  + W+     P        +   VV
Sbjct: 267 YLGYVL--TPEMPVVGALIATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNACVV 324

Query: 123 GLMAA 127
           GL+ A
Sbjct: 325 GLLLA 329