Pairwise Alignments

Query, 616 a.a., Lipid A export ATP-binding/permease protein MsbA from Xanthobacter sp. DMC5

Subject, 598 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  255 bits (652), Expect = 3e-72
 Identities = 175/560 (31%), Positives = 278/560 (49%), Gaps = 18/560 (3%)

Query: 34  WKGYV-LAFVFMGTMAACTAGLAYLMNDAVNAIFVHPTPAAVWAVSGIVMVLSIIKGASA 92
           +KG V LA   +      + GL +++ D V+ +  + T  A+    G+V+    ++  + 
Sbjct: 29  YKGRVALAMSCLIVAKLASVGLPFILKDLVDTLDANKTAQALSVPIGLVLAYGAVRLLTV 88

Query: 93  YGQSIT---MARIGNRVVADNQKRAFDRLLLQDAAYFGHRHTAEITTRFTAGASGARGAL 149
               I      R+  R +       FD L   D  +   R T  ++     G SG    +
Sbjct: 89  ITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTGGLSRDIERGTSGVSFLM 148

Query: 150 DLVVTSIGRDALSLVMLAGVAFVQD--PFLAVIALVVMPAAVIGTRKLIKKAKTIFTTGF 207
             +V +I    L + M+ G+ F      F A+    VM  A I    +  + +T +    
Sbjct: 149 RFMVFNIVPTLLEIAMVIGIFFFNYGIAFAAITFTSVM--AYIWFSVVATEWRTEYVRDA 206

Query: 208 TSGVKLSSI-VMEVFQGIRTVKAYTLEPVMRERTHKFIDDVEI--NANRLVRTQAKSSPL 264
                LS+   ++      TVK +  E    +R  + +D  E+    NRL          
Sbjct: 207 AKADSLSNTRAIDSLLNYETVKYFNNEKYESDRYDQALDQWEVAKRKNRLSLFALNGGQA 266

Query: 265 METLGGLAIGGVILYAGYNVIELGRSPGQFFSVLTALLLAYEPAKRLSRLHVELVSHVMG 324
           +  +  LA+  ++  A Y V     + G F  +   ++  + P   L  ++ E+   +  
Sbjct: 267 L--IIALAMTAMMALAAYKVTNNEMTLGDFVLINAFMMQLFMPLNFLGFVYREIRGALAN 324

Query: 325 ARMLFDLLDAPAPDADSSGVGALPRPRGRVEFKDVVFAY--RPGENVLRSLDLVAEPGRT 382
              +F LLD      D          RG + F+ V F+Y  RP   +LR++      G+ 
Sbjct: 325 IERMFSLLDKHPRIVDKPDAFDFEPKRGELSFEHVSFSYDDRP---ILRNVSFKVTAGKK 381

Query: 383 TALVGQSGGGKTTIINLIERFYDPQSGAVLIDDVDTRSVSRTSVRASVALVSQDVYLFSG 442
            A+VG SG GK+T+I L+ RFYD + G +LID  D R +++ ++R ++A+V QD  LF+ 
Sbjct: 382 VAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFND 441

Query: 443 TIRENIGFGRPGASEEEIVAAAKAAHAHPFIMSFENGYDTAVGEHGAQLSGGQRQRIAIA 502
           ++ ENI +GRP A++EE+  A K AH   FI S   G+DT VGE G +LSGG++QR+AIA
Sbjct: 442 SLVENIRYGRPDATDEEVRHAIKLAHLEHFIASLSQGWDTKVGERGLKLSGGEKQRVAIA 501

Query: 503 RAFLKNAPILLLDEATAALDSESEAEVQKALAELAHERTTIVIAHRLQTVVRADRICVIE 562
           RA LK +P+L+ DEAT++LDS SE  +  AL E+A   T++V+AHRL T+V AD+I V+ 
Sbjct: 502 RAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVDADQIVVLS 561

Query: 563 GGRVVESGTHDELIARRGRY 582
            G +VE G H  L+A+ G Y
Sbjct: 562 QGEIVEQGNHQSLLAQNGLY 581