Pairwise Alignments

Query, 424 a.a., Outer membrane efflux protein BepC from Xanthobacter sp. DMC5

Subject, 449 a.a., ABC-type protease exporter, outer membrane component PrtF/AprF from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (249), Expect = 9e-26
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 8/306 (2%)

Query: 82  RNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIALLELQNKSLAAFQQELRATRDRF 141
           R   +Q   + E  R   Q +L+  ++ Y   + A   +++      AF+Q+ R     F
Sbjct: 114 RKGVAQALFADENFRGKSQELLVRVLSHYTQALFAQDQIDIAQAKKKAFEQQFRQNEHLF 173

Query: 142 NVGEVTRTDVAQAEARVADAQYQVSQAVANLSTAKANYRQVIGVEPGKLTTPRSIEGTL- 200
             GE TRTD+ +A+AR   A  +  +A      A      +IGV    +     +  T  
Sbjct: 174 RQGEGTRTDILEAQARYELAIAEEIEARDEQDAALRELGSLIGVPALDIGDLAPLHDTFQ 233

Query: 201 -----PVSVDKVISTGLSSHPAVKASEFAVDAAMFQVKVAEGGLMPNLSLQGQLSQSYDQ 255
                P S D      +S++P++ +   AVD A F+V+    G +P +S    + Q+  +
Sbjct: 234 TFALQPASFDTWHELAVSNNPSLASQRQAVDVARFEVERNRAGHLPKVSAYATMRQNESE 293

Query: 256 NFSVDSQAGAAMTLNL--SVPIYQGGVEYANIRQAKELLTQARIEVDVNRDTIRAQAVQY 313
           + +  +Q     T+ L  SVP+Y GG   A+ RQA   + QA  E+D        +  + 
Sbjct: 294 SGNTYNQRYDTNTIGLEVSVPLYAGGGVSASTRQASRTMEQAEYELDAKTRETLIELRRQ 353

Query: 314 WGALEAAKAQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTNSQSSLVVAQ 373
           + A  +   +++A Q ++++    +   R+    G+R   D LNA++ L +++  L  A+
Sbjct: 354 FSACVSGVNKLRAYQKALSSAEALVVSTRQSILGGERVNLDALNAEQQLYSTRRDLAQAR 413

Query: 374 RDRVVA 379
            D ++A
Sbjct: 414 YDYLMA 419



 Score = 38.1 bits (87), Expect = 5e-07
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 3/168 (1%)

Query: 1   MAYTNNPTLNAQRAGTRATDETVPQALSGYRPTLNATAQAGPEFAKQQASGVKTNGWLWP 60
           +A +NNP+L +QR         V +  +G+ P ++A A        +  SG   N     
Sbjct: 248 LAVSNNPSLASQRQAVDVARFEVERNRAGHLPKVSAYATMR---QNESESGNTYNQRYDT 304

Query: 61  RAFALNAAYTLFNGFVTANQTRNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIALL 120
               L  +  L+ G   +  TR A   +  +   L    +  L+     +   +  +  L
Sbjct: 305 NTIGLEVSVPLYAGGGVSASTRQASRTMEQAEYELDAKTRETLIELRRQFSACVSGVNKL 364

Query: 121 ELQNKSLAAFQQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQA 168
               K+L++ +  + +TR     GE    D   AE ++   +  ++QA
Sbjct: 365 RAYQKALSSAEALVVSTRQSILGGERVNLDALNAEQQLYSTRRDLAQA 412