Pairwise Alignments

Query, 424 a.a., Outer membrane efflux protein BepC from Xanthobacter sp. DMC5

Subject, 449 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 69/306 (22%), Positives = 141/306 (46%), Gaps = 8/306 (2%)

Query: 82  RNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIALLELQNKSLAAFQQELRATRDRF 141
           R   +Q   + ET R+  Q +L+  +T Y   + A   + +      AF+++    R  F
Sbjct: 117 RKGLAQALFADETFRSKSQELLVRVLTLYTQALFAQDQINIARAKQQAFERQFAQNRQMF 176

Query: 142 NVGEVTRTDVAQAEARVADAQYQVSQAVANLSTAKANYRQVIG---VEPGKLTTPRSIEG 198
             GE TRTD+ +AE+R   A  +  +A      A      ++G   ++  +L   R    
Sbjct: 177 ERGEGTRTDILEAESRNELAIAEQIEASDEQDAALRELAALLGEPSIDVAQLEPLRDSFQ 236

Query: 199 TL---PVSVDKVISTGLSSHPAVKASEFAVDAAMFQVKVAEGGLMPNLSLQGQLSQSYDQ 255
            L   P S  +  +  +++ P + +   +++ A ++V+    G +P ++    + Q+   
Sbjct: 237 ALVLAPSSFTEWHALAMANSPILASQRQSLEVARYEVERNRAGHLPTVNAYASIRQNESD 296

Query: 256 NFSVDSQAGAAMTLN--LSVPIYQGGVEYANIRQAKELLTQARIEVDVNRDTIRAQAVQY 313
           + +  +Q     T+   LS+P+Y GG   A++RQA     QA  E++        +  + 
Sbjct: 297 SGNTYNQRYDTNTIGIELSLPLYAGGGTSASVRQANSKREQAEYELEGKTRETLIELRRQ 356

Query: 314 WGALEAAKAQIQAAQASVAANTLALEGVREEWRVGQRTTTDVLNAQRDLTNSQSSLVVAQ 373
           + A  +   +++A Q ++ +    +E  R+    G+R + D LNA++ L +++  L  A+
Sbjct: 357 FNACASGVNKLRAYQKALISAQALVESTRQSILGGERISLDALNAEQQLYSTRRDLAKAR 416

Query: 374 RDRVVA 379
            D ++A
Sbjct: 417 YDYLMA 422



 Score = 38.9 bits (89), Expect = 3e-07
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 3/168 (1%)

Query: 1   MAYTNNPTLNAQRAGTRATDETVPQALSGYRPTLNATAQAGPEFAKQQASGVKTNGWLWP 60
           +A  N+P L +QR         V +  +G+ PT+NA A        +  SG   N     
Sbjct: 251 LAMANSPILASQRQSLEVARYEVERNRAGHLPTVNAYASIR---QNESDSGNTYNQRYDT 307

Query: 61  RAFALNAAYTLFNGFVTANQTRNAESQVRGSRETLRNTEQSVLLNGVTAYMNVIQAIALL 120
               +  +  L+ G  T+   R A S+   +   L    +  L+     +      +  L
Sbjct: 308 NTIGIELSLPLYAGGGTSASVRQANSKREQAEYELEGKTRETLIELRRQFNACASGVNKL 367

Query: 121 ELQNKSLAAFQQELRATRDRFNVGEVTRTDVAQAEARVADAQYQVSQA 168
               K+L + Q  + +TR     GE    D   AE ++   +  +++A
Sbjct: 368 RAYQKALISAQALVESTRQSILGGERISLDALNAEQQLYSTRRDLAKA 415