Pairwise Alignments

Query, 929 a.a., Valine--tRNA ligase from Xanthobacter sp. DMC5

Subject, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  178 bits (451), Expect = 2e-48
 Identities = 194/806 (24%), Positives = 323/806 (40%), Gaps = 127/806 (15%)

Query: 12  EERIADRWENAGAFRCGRPERKDAEGFSIVIPPPNVTGSLHMGHALNNTLQDVLARFERM 71
           E  + +RW   G ++  R  R     F +   PP   GS+H+GH++N  L+D++ + + M
Sbjct: 25  EPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYANGSIHIGHSVNKILKDIIVKSKTM 84

Query: 72  RGKDVLWQPGTDHAGIATQMVVERQLAAQKLPGRRDLGREAFIEKVWAWKAESGGTIVNQ 131
            G D  + PG D  G+  ++ VE+++     PG++    E F E+   + AE        
Sbjct: 85  SGFDAPYVPGWDCHGLPIELKVEQKVGK---PGQKISAAE-FREECRKYAAEQVDGQRED 140

Query: 132 LKKLGASCDWSRERFTMDEGLSRAVLKVFVQLYREGLIYKDKRLVNWDPKLITAISDLEV 191
             +LG   DW     TMD      +++   ++   G ++K  + V+W     +A+++ EV
Sbjct: 141 FIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHKGVKPVHWCTDCGSALAEAEV 200

Query: 192 LQVEVKGNLWHLRYPIEGEKDRFI-------------VVATTRPETMLGDTAVAVHPD-- 236
              +       + +     K   +             V+ TT P T+  + A+++ P+  
Sbjct: 201 EYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIWTTTPWTLPANRALSISPELD 260

Query: 237 ---DERYRDLIGKHVIL-----------------------------------PLVGRRIP 258
               E  +D +   VIL                                   P +   +P
Sbjct: 261 YSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKIKGAALELVRFKHPFLAFDVP 320

Query: 259 IVADEYSDPGKGSGAVKITPAHDFNDFDVGRRHDLPMINVLDAEARIDPQGIQDDYAERP 318
            +  ++     G+G V   P H  +DF VG+++ L + N         P G    Y    
Sbjct: 321 AILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVAN---------PVGDNGVYKPDT 371

Query: 319 EAYVDLPDGAGVLTHLAGMDRFAARKHIVELLTSLELLEKIEPHTYMVPHGDRSNVVIEP 378
           E +             AG   F A  ++V LL     L     + +  PH  R    I  
Sbjct: 372 EFF-------------AGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIF 418

Query: 379 WLTDQWYV--DAKTLAQPALAAVREGRTTFVPKNWEKTYFEWLENIQPWCISRQLWWGHQ 436
             T QW++  D   L + AL+ + +    ++P   +    + +EN   WCISRQ  WG  
Sbjct: 419 RATPQWFISMDNHNLRKQALSEIEQ--IQWIPDWGQSRIEKMVENRPDWCISRQRTWGVP 476

Query: 437 IPAWYDPFGNVFVAEDEDQAFEEA--LAHNVGNESLSPEEAQALID-DA----DKRAQFL 489
           I         +FV  + ++   ++  L   V N  +  E  QA  D DA     + A+  
Sbjct: 477 I--------TLFVHRETEELHPDSVSLMARVANR-IEQEGIQAWWDLDAAELLGEEAEQY 527

Query: 490 TRDEDVLDTWFSSALWPFSTMGWPDETAELKKFYPTSV--LVTGFDIIFFWVARMMMMGL 547
            +  D LD W+ S     ST       A   +F+   V   + G D    W    +M+  
Sbjct: 528 RKVTDTLDVWYDSG----STFA--SVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMIST 581

Query: 548 HFMDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFTLAAMAAQGR 607
             M G+ P+K V  H    D KG KMSKS GNVI P  +  K GAD LR  +AA    G 
Sbjct: 582 A-MTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGE 640

Query: 608 ---DIKLATSRVEGYRNFATKLWNAVRFAQMNGCVRTDGFDP----AKVEG--TLNRWII 658
                ++     + YR    ++ N  RF   N     +GFDP      VE    L+RW +
Sbjct: 641 MTVSDEILNRSADAYR----RIRNTARFLLAN----LNGFDPKNDLVAVEDMVALDRWAV 692

Query: 659 GEAARASSEVSEAILAYRFNEAAGAVYRFIWNVVCDWHLELAK--PVLSGPDGAAKDETR 716
             AA    E+ EA   Y F+     + +F    +  ++L++ K     +  +G A+   +
Sbjct: 693 RRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQ 752

Query: 717 AATAYVLDVAMGLLHPFMPFLTEELW 742
           +A  ++ +  +  + P + F  +E+W
Sbjct: 753 SALFHIAEAMVRWIAPVLSFTADEVW 778