Pairwise Alignments

Query, 929 a.a., Valine--tRNA ligase from Xanthobacter sp. DMC5

Subject, 879 a.a., valyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  654 bits (1687), Expect = 0.0
 Identities = 380/918 (41%), Positives = 537/918 (58%), Gaps = 68/918 (7%)

Query: 2   LEKVFDPAAVEERIADRWENAGAFRCGRPERKDAEGFSIVIPPPNVTGSLHMGHALNNTL 61
           L   ++PA VE +    W     F   +P+ +  E ++IVIPPPNVTG LHMGH LNNT+
Sbjct: 3   LASKYNPADVEGKWYQYWLEHRLFS-SKPDGR--EPYTIVIPPPNVTGVLHMGHMLNNTI 59

Query: 62  QDVLARFERMRGKDVLWQPGTDHAGIATQMVVERQLAAQKLPGRRDLGREAFIEKVWAWK 121
           QD+L R  RM GK+  W PGTDHA IAT+  V  +LAAQ +  + DL R+ F++  W W 
Sbjct: 60  QDILVRRARMEGKNACWVPGTDHASIATEAKVVNKLAAQGIK-KTDLTRDEFLKHAWDWT 118

Query: 122 AESGGTIVNQLKKLGASCDWSRERFTMDEGLSRAVLKVFVQLYREGLIYKDKRLVNWDPK 181
            E GG I+ QL+KLGASCDW R  FTMDE  S++VLKVFV LY +GLIY+  R+VNWDPK
Sbjct: 119 EEHGGIILKQLRKLGASCDWDRTAFTMDEERSKSVLKVFVDLYNKGLIYRGVRMVNWDPK 178

Query: 182 LITAISDLEVLQVEVKGNLWHLRYPIEGEKD-RFIVVATTRPETMLGDTAVAVHPDDERY 240
            +TA+SD EV+  E  G L++LRY +EG+ + R+ VVATTRPET++GDTA+ ++P+D + 
Sbjct: 179 ALTALSDEEVIYKEEHGKLFYLRYKVEGDPEGRYAVVATTRPETIMGDTAMCINPNDPKN 238

Query: 241 RDLIGKHVILPLVGRRIPIVADEYSDPGKGSGAVKITPAHDFNDFDVGRRHDLPMINVLD 300
             L GK VI+PLV R IP++ D+Y D   G+G +K+TPAHD ND+ +G +++LP I++ +
Sbjct: 239 AWLKGKKVIVPLVNRVIPVIEDDYVDIEFGTGCLKVTPAHDVNDYMLGEKYNLPSIDIFN 298

Query: 301 AEARIDPQGIQDDYAERPEAYVDLPDGAGVLTHLAGMDRFAARKHIVELLTSLELLEKIE 360
                                  L + AG+     GMDRF  RK I + L +  LLEK E
Sbjct: 299 DNG-------------------TLSEAAGL---YIGMDRFDVRKQIEKDLDAAGLLEKTE 336

Query: 361 PHTYMVPHGDRSNVVIEPWLTDQWYVDAKTLAQPALAAVREGRTTFVPKNWEKTYFEWLE 420
            +T  V + +R+NVVIEP L+ QW++  +  A  AL  V      F P  ++ TY  W+E
Sbjct: 337 AYTNKVGYSERTNVVIEPKLSMQWFLKMQHFADMALPPVMNDELKFYPAKYKNTYRHWME 396

Query: 421 NIQPWCISRQLWWGHQIPAWYDPFGNVFVAEDEDQAFEEALAHNVGNESLSPEEAQALID 480
           NI+ WCISRQLWWGH+IPA++ P G   VA   ++A  +A     GN +L+ ++      
Sbjct: 397 NIKDWCISRQLWWGHRIPAYFLPEGGYVVAATPEEALAKA-KEKTGNAALTMDD------ 449

Query: 481 DADKRAQFLTRDEDVLDTWFSSALWPFSTMGWPDE--TAELKKFYPTSVLVTGFDIIFFW 538
                   L +DED LDTWFSS LWP S     +     E+  +YPTS LVTG DIIFFW
Sbjct: 450 --------LRQDEDCLDTWFSSWLWPISLFDGINHPGNEEISYYYPTSDLVTGPDIIFFW 501

Query: 539 VARMMMMGLHFMDGEVPFKDVYIHALVRDEKGAKMSKSKGNVIDPLDLVEKYGADALRFT 598
           VARM+M+G  + +G++PFK+VY   +VRD+ G KMSKS GN  DPL+L++KYGAD +R  
Sbjct: 502 VARMIMVGYEY-EGKMPFKNVYFTGIVRDKLGRKMSKSLGNSPDPLELIDKYGADGVRMG 560

Query: 599 LAAMAAQGRDIKLATSRVEGYRNFATKLWNAVRFAQMNGCVRTDGFDPAKVEGTLNRWII 658
           +   A  G DI    +  E  RNF +K+WNA R   + G    D    +        W  
Sbjct: 561 MMLAAPAGNDILFDDALCEQGRNFCSKIWNAFRL--IKGWTVDDNIQASDAAKLAVHWFE 618

Query: 659 GEAARASSEVSEAILAYRFNEAAGAVYRFIWNVVCDWHLELAKPVLSGPDGAAKDETR-A 717
            +    ++EV++    YR +EA  AVY+  W+    W+LE+ KP      G   D T  +
Sbjct: 619 SKQNEVAAEVADLFSKYRLSEALMAVYKLFWDEFSSWYLEMIKPAY----GQGIDRTTYS 674

Query: 718 ATAYVLDVAMGLLHPFMPFLTEELWAE----TGKEGPA-RTSLLALAPWPDLTGLEAPDA 772
           AT   LD  + LLHPFMPF+TEELW +      +EG +   S L++  + D   +    A
Sbjct: 675 ATLCFLDNLLHLLHPFMPFITEELWQQMYERNAEEGESLMVSALSMDTYVDTAFV----A 730

Query: 773 EAEVGWVVDLVTEIRSVRAEMNVPAGAQVPLVLVQPGAETTARVAAWDDAIRRLARLSDV 832
           + EV  V  +++ IRS+R + N+    + PL L   G      VA ++  I+++  LS +
Sbjct: 731 QFEV--VKGVISNIRSIRLQKNI--AQKEPLDLQVLGENP---VAEFNAVIQKMCNLSSI 783

Query: 833 SVSDQVPASSVQMVVRGEVVALPLAGVVDLGAELARLRKEEGKLDQEVARIDAKLSNESF 892
           +V +     +   +V     A+PL  ++D+ AE+AR+  E    +  +  +  KLSNE F
Sbjct: 784 TVVESKAEGASSFMVGTTEYAVPLGNMIDVEAEIARMEAELKHKEGFLQGVLKKLSNEKF 843

Query: 893 VARAPEEVVEAEREKREE 910
           +  AP  V+E ER+K+ +
Sbjct: 844 INNAPAAVLEMERKKQAD 861