Pairwise Alignments

Query, 262 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 12/255 (4%)

Query: 1   MRIATWNANSIRQRLDHA-VRWLGESRPDVVCIQEIKCQTEAFPKEPFEALGYNVSVHGQ 59
           M++ +WN N IR  L +  + +L    PD++CIQE K Q+    +   +      +   +
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQV-QLGLDGYFQYWNYAER 59

Query: 60  KGFNGVALLSRLPLEDVTHGLAGDDGDEQARFIEAVVSVKGGVVRVACIYLPNGNPPDTE 119
           KG++G A+ +++   +V  G+   + + + R    V++++     +  +Y PN     T 
Sbjct: 60  KGYSGTAIFTKIKPNNVILGMENSEHNNEGR----VITLEFDEYYLVNVYTPNSQRGLT- 114

Query: 120 KYPYKLGFMERLSAFAADRLKLEEPLVLAGDFNVIPESRDAADPAAWTSDALFLPRTRQA 179
           +  Y+  + E   ++    L+ ++P+V  GD NV  +  D  +P     +A F P  R  
Sbjct: 115 RLEYRQKWDEDFLSYIKT-LETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNG 173

Query: 180 FRSLLNLGFTDALRATSDAGRLFTFWDYQAGAWQRDNGIRIDHLLLSPQAADRLIATGVD 239
           F +++N GF D  R  ++    +++W Y+  A  R+ G RID+  +S    + L     D
Sbjct: 174 FDNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNL----KD 229

Query: 240 KHVRAWEKPSDHVPV 254
            ++      SDH PV
Sbjct: 230 AYIMPEVMGSDHCPV 244