Pairwise Alignments

Query, 339 a.a., tRNA-dihydrouridine synthase B from Xanthobacter sp. DMC5

Subject, 323 a.a., tRNA dihydrouridine(16) synthase DusC from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (280), Expect = 1e-29
 Identities = 81/230 (35%), Positives = 114/230 (49%), Gaps = 12/230 (5%)

Query: 17  VILAPMAGITDAPVRRMAVR-HGAGLVISEML-ASEALLEGH------PEMLLRAEGEGV 68
           VIL PM G+ D  +R M  + +     ++E +     LL  H      PE+   ++    
Sbjct: 3   VILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPSG 62

Query: 69  SFHAVQLAGNDPRLMGEAARVAEATGAGLVDINMGCPAKRVTTGAAGAALLRDLPLARAI 128
               VQL G DP  M E A  A   GA  +D+N GCPAK V     GAALL+   L   +
Sbjct: 63  VPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQV 122

Query: 129 FEAVRGAV--SVPVTVKTRLGWDDGSPTAVALAEMAEACGLSMVTIHGRTRCQFY-TGRA 185
            +A R AV   +PV+ K RLGW+D       +  +A+A     +T+H RT+   Y     
Sbjct: 123 VKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQA-KADELTVHARTKAGGYKASEI 181

Query: 186 DWSAIRAVKNAVSIPVIANGDVVSLADGPAILAASGADGVMIGRGAQGRP 235
            W  I  ++   SIP+IANG+V + ADG A +  +G D +M+ RGA   P
Sbjct: 182 KWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVP 231