Pairwise Alignments

Query, 339 a.a., tRNA-dihydrouridine synthase B from Xanthobacter sp. DMC5

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 36/298 (12%)

Query: 19  LAPMAGITDAPVRRM-AVRHGAGLVISEMLASEALLEGHPEMLLRAEGEGVSFHAVQLAG 77
           +APM   TD   R    +     L+ +EM+ + A++ G  + L   + E     A+Q  G
Sbjct: 9   VAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFLAYNQEEHPV--ALQFGG 66

Query: 78  NDPRLMGEAARVAEATGAGLVDINMGCPAKRVTTGAAGAALLRDLPLARAIFEAVRGAVS 137
           ++P+ +   A++A+  G   +++N+GCP+ RV  G  GA L+ +  L      A+R  V 
Sbjct: 67  SNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVD 126

Query: 138 VPVTVKTRLGWDDGSP---TAVALAEMAEACGLSMVTIHGRTRCQFYTGRA--------- 185
           +PVTVKTR+G DD          +A +AE  G    TIH R    + +G +         
Sbjct: 127 IPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARK--AWLSGLSPKENREIPP 184

Query: 186 -DW-SAIRAVKNAVSIPVIANGDVVSLADGPAILAASGADGVMIGRGAQGRPWFPGRVAQ 243
            D+  A +  ++   + +  NG V SL +  A L     DGVMIGR A   P+    V Q
Sbjct: 185 LDYPRAYQIKRDFPHLTIAVNGGVKSLEE--AKLHLQHLDGVMIGREAYQNPYLLAEVDQ 242

Query: 244 ALAG---------RVLEEDPPLDLQRDI-----LLELYEGWLSLYGTALGVRQARKHI 287
            + G         +V+ E  P  ++R++     L  +    L L+    G RQ R+HI
Sbjct: 243 QIFGLETPVKKRSQVIHEMMPY-IERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHI 299