Pairwise Alignments

Query, 480 a.a., DNA-binding transcriptional regulator NtrC from Xanthobacter sp. DMC5

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  384 bits (985), Expect = e-111
 Identities = 211/476 (44%), Positives = 305/476 (64%), Gaps = 16/476 (3%)

Query: 1   MPSGSILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDE 60
           M  G + V DDD++IR V+ + LS A  +  +  +A ++   + +   D++++D+ MP  
Sbjct: 1   MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGM 60

Query: 61  NAFDLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISIVGRALA 120
           +   LL ++ +  P+LPVI+M+A +    A+ A ++GA+EYLPKPFD+ E +++V RA+A
Sbjct: 61  DGIALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIA 120

Query: 121 EPKKGDGHHHAPEEQDNIP-LVGRSPAMQEIYRLLARLMQTDLTVMIAGESGTGKELVAR 179
             ++     H P E  + P ++G +PAMQE++R + RL ++ ++V+I GESGTGKELVA 
Sbjct: 121 HGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAH 180

Query: 180 ALHDYGKRRTGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNPGRFEQAEGGTLFLD 239
           ALH +  R   PF+A+NMAAIP+DLIESELFGHEKG+FTGA T   GRFEQA GGTLFLD
Sbjct: 181 ALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD 240

Query: 240 EIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFF 299
           EIGDMP++ QTRLLRVL  G++  VGG   IK DVRI+AAT+++L  L+ QG FREDLF 
Sbjct: 241 EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFH 300

Query: 300 RLNVVPLRLPPLRERSEDVPDLVRHFFLQAERE-GLPAKQIDSAALDRLKRYRWPGNVRE 358
           RLNV+ + +P LRER +D+  L +HF   A +E G+  K ++   +D L +  WPGNVR+
Sbjct: 301 RLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQ 360

Query: 359 LENLVRRLAALYPQEVITPAIIEAELSEPMPNMLSEEGPVDATLAASVERHLNTYFS--- 415
           LEN+ R L  +     + P+ + +EL       LSE          S ++ L T+     
Sbjct: 361 LENMCRWLTVMASGSEVLPSDLPSEL-------LSERKASHFDNDISWQKQLETWAKSAL 413

Query: 416 GFGENLPPPGLYHRILKDVEYPLLSAALAATRGNQIKAAELLGLNRNTLRKKIRDL 471
             GE      L    L + E  LL AAL  T G++ +AA++LG  RNTL +K+++L
Sbjct: 414 ASGET----ELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465