Pairwise Alignments

Query, 455 a.a., DNA-binding transcriptional regulator NtrC from Xanthobacter sp. DMC5

Subject, 444 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  287 bits (734), Expect = 5e-82
 Identities = 173/456 (37%), Positives = 261/456 (57%), Gaps = 23/456 (5%)

Query: 1   MAMDILIVDDEADIGELVAGILEDEGYSARTARDADGALGAIATRRPNLVFLDIWLQGSR 60
           MA+ IL+V+DE    EL+ G+L+ EGY  R A   + A+ +I    P+LVF D W  G +
Sbjct: 1   MALSILVVEDEPGQRELIVGMLKTEGYRLREADCVEAAIVSIKADTPDLVFSD-WKLG-Q 58

Query: 61  LDGLELLNEIKSQHPDLPVVMISGHGNIETAVAAIKRGAYDFIEKPFNADRLVMVTERAL 120
           L G++LLN +K + PD+  +M + +G I  AV AI+ GA D++ KP+    L++   +  
Sbjct: 59  LSGMDLLNYVKREFPDVGFIMATAYGTITHAVDAIQAGADDYLTKPYQRQALLLAISKVA 118

Query: 121 ETLRLKRELKELKQLTPHGRILIG---RSSAIQQLKGTIERVGPTNSRILIVGPSGSGKE 177
            +  L++E K L       + L+G   ++  +Q +   I R+  T++ +LI G SG+GKE
Sbjct: 119 RSQALRKENKALSLALSEQQSLVGLVGKAPCMQGVFDRISRISGTDATVLIGGESGTGKE 178

Query: 178 LTARLIHSVSGRAQGPFVVLNSAAMTPERLEFELFGVAEGE---GREQKRGALEEAHGGT 234
           L AR +H +S RA  PF+ +N  A+     E ELFG  +G        K G LE AHGGT
Sbjct: 179 LAARALHQLSRRAHMPFIAINCGAIPENIAEAELFGAEKGAFTGATALKLGKLEAAHGGT 238

Query: 235 LFLDEIADMPRETQNRVLRVLVEQTFTRVGSNDKVTVDVRIISSTGRNLEEEIAKGRFRE 294
           +FLDEI ++P   Q ++LR L E T TRVG+  ++ +DVR+I++T R+L  E+A+ RFRE
Sbjct: 239 VFLDEIGELPLLQQTKLLRFLQEGTITRVGAQKELQLDVRVIAATHRDLRLEVAEARFRE 298

Query: 295 DLYHRLSVVPIRVPPLAERREDIPDLVDFFLDSISQTTGLPRRPIGEDAMAVLQSHDWPG 354
           DL++RL+VVP+ +PPL ERREDI  LV+ FL   +   G  +  I   A+  L  + WPG
Sbjct: 299 DLFYRLNVVPVLMPPLRERREDIGRLVEHFLKLHASQYGFDQPKISPTALRFLLDYRWPG 358

Query: 355 NVRQLRNNVERLLILAGGDPEATITAAMLPPDVGALVPTLPNGNGGEHLMGLPLREAREV 414
           NVR+L N +ER ++L G + E    +     + G  +P      G E           E 
Sbjct: 359 NVRELSNRIERFVLL-GDEAELMQVSEHASKEPGLQLP----DEGIEW----------EA 403

Query: 415 FEREYLAAQINRFGGNISRTAEFVGMERSALHRKLK 450
           FE   L+  + RF GN ++ A+++GM   A   +L+
Sbjct: 404 FEARCLSQAMARFDGNRTKAAKWLGMSYKAFLYRLE 439