Pairwise Alignments

Query, 455 a.a., DNA-binding transcriptional regulator NtrC from Xanthobacter sp. DMC5

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (684), Expect = 4e-76
 Identities = 165/474 (34%), Positives = 261/474 (55%), Gaps = 30/474 (6%)

Query: 1   MAMDILIVDDEADIGELVAGILEDEGYSARTARDADGALGAIATRRPNLVFLDIWLQGSR 60
           M   + ++DD++ I  +V   L+    S  +   A+    A+   +P ++  DI + G+ 
Sbjct: 1   MTEKVWVLDDDSSIRWVVERALKGAKISCASFAAAESLWQALEQTQPQVIISDIRMPGT- 59

Query: 61  LDGLELLNEIKSQHPDLPVVMISGHGNIETAVAAIKRGAYDFIEKPFNADRLVMVTERAL 120
            DGL LL+ ++  +P +PV++++ H ++++AV+A + GA++++ KPF+ D  + + ERAL
Sbjct: 60  -DGLTLLDRLQLHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAIGLVERAL 118

Query: 121 ETLRLKRELKELKQLTPHGRILIGRSSAIQQLKGTIERVGPTNSRILIVGPSGSGKELTA 180
              + ++  K + Q       +IG + A+Q++   I R+  ++  +LI G SG+GKEL A
Sbjct: 119 SHAK-EQSPKVISQPEVKAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVA 177

Query: 181 RLIHSVSGRAQGPFVVLNSAAMTPERLEFELFGVAEGE---GREQKRGALEEAHGGTLFL 237
             +H  S R   PF+ LN AA+  E +E ELFG  +G        ++G  E+A GGTLFL
Sbjct: 178 GALHKHSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGAANVRQGRFEQADGGTLFL 237

Query: 238 DEIADMPRETQNRVLRVLVEQTFTRVGSNDKVTVDVRIISSTGRNLEEEIAKGRFREDLY 297
           DEI DMP + Q R+LRVL +  F R+G +  V VDVRII++T +NLE  +AKG FREDL+
Sbjct: 238 DEIGDMPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESLVAKGDFREDLF 297

Query: 298 HRLSVVPIRVPPLAERREDIPDLVDFFLDSISQTTGLPRRPIGEDAMAVLQSHDWPGNVR 357
           HRL+V+ + +PPL++RREDIP L   FL + ++   +  + + +     L S  WPGNVR
Sbjct: 298 HRLNVIRVHLPPLSQRREDIPQLARHFLATAAKEISVEPKILTKATADTLASLPWPGNVR 357

Query: 358 QLRNNVERLLILAGGDPEATITAAMLPPDVGALVP-----TLPNGNGGEHLMGLP----- 407
           QL N    L+++A G     I    LPP++  L P     + P    G     L      
Sbjct: 358 QLENTCRWLMVMASGQ---EILPQDLPPEL--LTPSNSHDSSPQAGSGGWQEALTQWIDQ 412

Query: 408 ---------LREAREVFEREYLAAQINRFGGNISRTAEFVGMERSALHRKLKAL 452
                    L + +  FE+  L   +    G+    A+ +G  R+ L RKLK L
Sbjct: 413 RLSEGESDLLTQIQPAFEKILLETALKHTKGHKQEAAKRLGWGRNTLTRKLKEL 466