Pairwise Alignments

Query, 458 a.a., Trk system potassium uptake protein TrkA from Xanthobacter sp. DMC5

Subject, 469 a.a., potassium uptake protein TrkA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  329 bits (843), Expect = 1e-94
 Identities = 190/472 (40%), Positives = 282/472 (59%), Gaps = 17/472 (3%)

Query: 1   MKVVICGAGQVGFGIAERLAGEQNDVSIIDTSPRRIQMVTEQLDVRGVVGQGSHPDVLAR 60
           MK++I GAGQVG  +AE L GE ND++I+D+   R++ + ++ D+R V G G+HP+VL  
Sbjct: 1   MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPNVLKE 60

Query: 61  AGIEQADMLIAVTLHDEVNMVACQVGHALFNVPTKLARIRAQTYLAPEWR---------- 110
           AG E ADMLIAVT  DE NMVACQ+ ++LF  PTK+ARIR++ YLA   +          
Sbjct: 61  AGAEDADMLIAVTNSDECNMVACQMAYSLFGTPTKIARIRSEPYLAMRDKLFINSETKNS 120

Query: 111 DLFSRDQLPIDVIISPEVEVGEMVLRRLSLPGASDTVSFSDGAVVIVGVSCTEDCPVVDT 170
           D   R    ID +I+PE  V   + R +  PGA   + F++G + +V V      P+V  
Sbjct: 121 DGRPRGGFVIDELIAPEQLVTAYIERLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN 180

Query: 171 PLKQLTELFPDIQATIVAVGRGGRSFVPRSNDQLLTGDLVYFVAQADHVQRTLSLFGHDE 230
            L  L E  P+I   + A+ R GR  +PR    +   D V+FVA + H++  +S     +
Sbjct: 181 ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD 240

Query: 231 VPAQRIVIAGGGNIGYYVANELEKRNAAARVKLIESSRERSQAIAEELRRTVVLNGDALE 290
              + I+IAGGGNIG  +A  LE+ ++   VKLIE   ER++A++E+L  T V  GDA +
Sbjct: 241 NSYRNIMIAGGGNIGLGLAKRLERTHS---VKLIEHKFERAEALSEQLENTTVFCGDASD 297

Query: 291 RAILDEAGVGEADTMIALTNDDRINILSCLLSKQVGAKRILALLNEQGYATFARGLGIDA 350
           + +L E  + + D  IA+TNDD  NI+S LL+K++GAK+++ L+  + Y    +   ID 
Sbjct: 298 QELLLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDI 357

Query: 351 HVNPRQITVSKVLQHVRRGRIRGVHALLDGSGEMIEAEA---LETSPLVGKPLRDLGLLD 407
            ++P+Q T+S +L H+R+G I  V++L  G+ E IEA A     TS +VGK + D+ L  
Sbjct: 358 AISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSSTSKVVGKAIGDIKLPP 417

Query: 408 GLRIGAVVRNGQVLLPRGDFVVRAHDRVVLFALADR-IKRVEQLFRVALEFF 458
           G  IGA+VRN +VL+     V+   D VVLF +  + I  VE+LF+ +  FF
Sbjct: 418 GTTIGAIVRNEEVLMAHDKTVIEQGDHVVLFLVNKKFIGEVEKLFQPSAFFF 469