Pairwise Alignments

Query, 470 a.a., Trk system potassium uptake protein TrkH from Xanthobacter sp. DMC5

Subject, 485 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 1e-28
 Identities = 126/483 (26%), Positives = 211/483 (43%), Gaps = 35/483 (7%)

Query: 12  IAAIGAFALLPMAVAARTGTGPVAVWLATSGFCLFLAGLLRFTTHGLEMRLTRSGAVALV 71
           +A      L P  VA     G    +++T    L   GL  F     +  L       +V
Sbjct: 14  LALFSVSMLAPALVALIYRDGAGVPFVSTFFVLLLCGGLFWFPNRHHKHELKARDGFLIV 73

Query: 72  ACMWLVLPLM-ATP-AVAVVSGLSPLQAWFEALSAFTATGLT---ALHQGPASLYVFLGL 126
              W V+    A P  +A    +S   A+FE+ SA T TG T    L + P ++  +   
Sbjct: 74  VLFWTVIGSAGALPFLLAADPNISVTDAFFESFSALTTTGATVIVGLDELPKAILFYRQF 133

Query: 127 LQWAGGLLTVVTAVAVLAPAGLGGLP-DRTPRGGSALDVVDLVRVLREIAPA----YFGA 181
           LQW GG+  +V AVA+L   G+GG+   R    G   D     R+  E A A    Y   
Sbjct: 134 LQWFGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDTKVTPRI-AETAKALWYIYLSL 192

Query: 182 TVLAMLVLLASGETIYVAFTLATAVVSAGAHLPPEAQLALALDETPKWLLLPFLIFSATS 241
           T+        +G +++ A   + + ++ G     +A +          + + FL+ S+ +
Sbjct: 193 TIACASAFWLAGMSLFDAICHSFSTIAIGGFSTHDASMGYFDSYAINLITVVFLLISSCN 252

Query: 242 VRWH-RALITRRINAA-----PEQVESLVIIGWWVVLGIILGALLFRTDEMSS-VDAVRD 294
              H  A  T  ++       PE     VI    V+L +I  ++L +     S   A   
Sbjct: 253 FTLHYAAFATGGVHPKYYWRDPEFRAFFVI---QVLLFVICFSVLLKHHSYDSFYQAFDQ 309

Query: 295 GLFTAASLISTSGIGPHEGTYANLPLGLVILVV---LLGGGALSVAGGLKMLRLRAILLR 351
            LF   S+ +T+G       +++ PL L +L++    +GG A S  GG+K++R+  + L+
Sbjct: 310 ALFQTVSISTTAGF--TTTGFSDWPLFLPVLLLFSSFIGGCAGSTGGGMKVIRVLLLTLQ 367

Query: 352 TRGDLLRLVYPHIVLPSALEGGVGS--AMRGVWAGAASLAFLYGLCVIAL-SPGLPSLDA 408
              ++ RLV+P  + P  L G   S   +  VW   ++ A ++ +C++AL + G+  L +
Sbjct: 368 GAREMKRLVHPRAIYPIKLGGRALSQRVVDAVWGFFSAYALVFVVCMLALIATGMDEL-S 426

Query: 409 ALAAAAAVVTNTGP-VYDAAGGGWPAMSSLPWGSVLVAGIGMVAGRLEIIGLFVFIHLAI 467
           A +A AA + N GP + + A           W  +L+A   M+ GRLEI  L + +    
Sbjct: 427 AFSAVAATLNNLGPGLGEVAVHFADVNDKAKW--ILIA--SMLFGRLEIFTLLILLTPTF 482

Query: 468 WRT 470
           WR+
Sbjct: 483 WRS 485