Pairwise Alignments

Query, 470 a.a., Trk system potassium uptake protein TrkH from Xanthobacter sp. DMC5

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (297), Expect = 3e-31
 Identities = 130/480 (27%), Positives = 220/480 (45%), Gaps = 40/480 (8%)

Query: 17  AFALLPMAVAA---RTGTGPVAVWLATSGFCLFLAGLLRFTT--HGLEMRLTRSGAVALV 71
           + +LLP A+ A   + G G    +L      L L  +L +    H  ++R TR G + LV
Sbjct: 18  SLSLLPPALVAVIYKDGGG--TAFLQAFFLSLLLGFVLWYPNRRHKKDLR-TREGFM-LV 73

Query: 72  ACMWLVL-PLMATPAV-AVVSGLSPLQAWFEALSAFTATG---LTALHQGPASLYVFLGL 126
              W VL  + A P + +    LS   ++FE+ SA T TG   L  L   P ++  +  L
Sbjct: 74  VLFWGVLGSIGAVPFIFSSQPDLSLTDSFFESFSALTTTGATVLVGLDSLPKAILFYRHL 133

Query: 127 LQWAGGLLTVVTAVAVLAPAGLGGLP-DRTPRGGSALDVVDLVRVLREIAPA----YFGA 181
           LQW GG+  +V AVA+L   G+GG+   R    G   D     R+  E A A    Y   
Sbjct: 134 LQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRI-AETAKALWYIYLAL 192

Query: 182 TVLAMLVLLASGETIYVAFTLATAVVSAGAHLPPEAQLALALDETPKWLLLPFLIFSATS 241
           T+        +G  ++ A   + + ++ G     +A +          + + FL+ +A +
Sbjct: 193 TIACAFAYWVAGMDVFDAICHSFSTIAIGGFSTHDASMGYFDSTAINMVCVVFLLIAALN 252

Query: 242 VRWHRALITRR-----INAAPEQVESLVIIGWWVVLGIILGALLFRTDEMSSVDAVRD-G 295
              H A  TRR     +     + ++L++I   + L +I  A L+ T    S +   D  
Sbjct: 253 FSLHFAAFTRRGINLKVYLRDAEFKALIVI--QLALTLICFATLYHTGIYDSAEETFDFA 310

Query: 296 LFTAASLISTSGIGPHEGTYANLPLGLVILVV---LLGGGALSVAGGLKMLRLRAILLRT 352
           LF A S+ +T+G G    ++   PL L +L++    +GG   S AGG+K++R+  +LL+ 
Sbjct: 311 LFQAVSISTTAGFGTE--SFHMWPLFLPMLLIFSSFIGGCGGSTAGGIKVMRMILLLLQG 368

Query: 353 RGDLLRLVYPHIVLPSALEGGV--GSAMRGVWAGAASLAFLYGLC-VIALSPGLPSLDAA 409
             +L RLV+P  +    + G       +  VW   ++ A ++ +C +I ++ G+ ++  A
Sbjct: 369 SRELKRLVHPRGMFSIRINGKALPDRIIDAVWGFFSAYALVFVVCMLILMALGMDNI-TA 427

Query: 410 LAAAAAVVTNTGPVYDAAGGGWPAMSSLPWGSVLVAGIGMVAGRLEIIGLFVFIHLAIWR 469
            +A AA + N GP        +   +S+  G   V  + M+ GRLE+  L V      W+
Sbjct: 428 FSATAACLNNLGPGLGEVASNY---ASIGDGEKWVLVVAMLFGRLEVFTLLVLFTPTFWK 484