Pairwise Alignments

Query, 117 a.a., RNA-binding protein Hfq from Xanthobacter sp. DMC5

Subject, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 2e-19
 Identities = 35/65 (53%), Positives = 51/65 (78%), Gaps = 1/65 (1%)

Query: 40  QNLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIM 99
           Q+LQD FLN +R+ + P++I+LVNG+KLQG +  FD F +LL ++  +Q+VYKHAIST++
Sbjct: 5   QSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILL-KNTVNQMVYKHAISTVV 63

Query: 100 PGHPV 104
           P  PV
Sbjct: 64  PARPV 68