Pairwise Alignments

Query, 537 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  355 bits (910), Expect = e-102
 Identities = 194/506 (38%), Positives = 287/506 (56%), Gaps = 3/506 (0%)

Query: 16  LAGAGASLLLPAAARRAGAAPATGGTLVAVLDPEPAGLVAGLTISAPAVAVSANIFDGLV 75
           LA A A  +LP  +  A   P  GG++   +  EP  LV     +  A  +S    + L+
Sbjct: 23  LATATAMPVLPVPSF-AAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYYISGKATESLL 81

Query: 76  EYDEGFKLKPSLATSWETSADGTVITFRLRNDVTWHDGTPFTSADVAYSLLEVTKKVHPR 135
            YD+ F  +P LAT W  S DG    F+LR DV WHDG  FT+  VA+S+L + K+ HPR
Sbjct: 82  SYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILAL-KENHPR 140

Query: 136 GNAVFANLTAVDTPDPYTAVLRFSRPSPVVWAAFNGTETQILPKHLYEGTNPLTNPLNGK 195
           G A FA++   +  + +   L  ++P+P +  AF   E  I+PKHLYEGT    NP N  
Sbjct: 141 GRATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVA 200

Query: 196 PIGTGAFVFKEWVKGERIVLERNPNYWDKGRPYLDRVVFRIIRDPASRAAALETGEAQYI 255
           P+GTG + F EWV+G   +  RN +YW   +PYLD+++FR I DPA+  AA+ETGE Q  
Sbjct: 201 PVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVS 260

Query: 256 PLNPVPLSDVARIKASKDLVVETRGFEGPAPMYFFDFNLRREPFGDIRVRQAFAHALNRK 315
             N +PL+D+ R+KA+ +LVV+T        +   +FNL  +   DI+VR A AHA+++ 
Sbjct: 261 TAN-LPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVRHAIAHAVDKD 319

Query: 316 ALAETVFYGLAKPAAGPVPSYQTQFFATDLPQYDYNIAKAEALLDAAGLKKGADGVRLRI 375
            +  TV+ G A    GPV     +F++ DLP+Y+++ AK+E LLD AG  +GADG R ++
Sbjct: 320 FIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADGFRFKL 379

Query: 376 DHIPSAYGEDYRRAGEYFKQALKRIGVDVTLRNYDLPTYIKVVFTEYDFDTHSAWYSAYP 435
              P+      ++  EY  QAL ++G+ V LR  D  T++K VFT+ DFD      S   
Sbjct: 380 FIDPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLY 439

Query: 436 DPQIGVQRRYWSQAIKKGTPSSNASGIADPEIDAVIERIQTEGNVEKRNADIRELQRLAQ 495
           DP +GVQR YWS+  K G P +N S  ++PE+D ++E    E + +KR     E Q+L  
Sbjct: 440 DPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFNEFQKLVV 499

Query: 496 VKLPSVNLLELTFYRAYSAKLSGIDL 521
             LP+++++       Y  ++  + L
Sbjct: 500 EDLPTLDIVTPAVITVYDKRVKNLKL 525