Pairwise Alignments

Query, 537 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

Subject, 528 a.a., ABC transporter, extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  140 bits (352), Expect = 2e-37
 Identities = 136/484 (28%), Positives = 202/484 (41%), Gaps = 35/484 (7%)

Query: 62  PAVAVSANIFDGLVE-YDEGFKLKPSLATSWETSADGTVITFRLRNDVTWHDGTPFTSAD 120
           P + +  ++FD L+    +G  + P LA S+  S DGT +T  LR  + + DGTP T  D
Sbjct: 49  PDIWMVGSLFDTLLHPSQDGNSVVPGLAESYAVSDDGTTVTLTLREGIKFSDGTPLTGED 108

Query: 121 VAYSLLEVTKK-VHPRGNAVFANLTAVDTPDPYTAVLRFSRPSPVVWAAFNGTETQILPK 179
           V +SL       + P    +    T  +T +  T  L  S P P + +      T ++ K
Sbjct: 109 VVFSLNRARDADLSPWAGLLGTLDTVANTGNEITLTL--SAPDPTILSMLATFTTGVVSK 166

Query: 180 HLYEGTNPLTNPLNGKPI--------GTGAFVFKEWVKGERIVLERNPNYWDKGR----- 226
             +E  +  T+      I        GTG F    + +G  +    N +YW  G      
Sbjct: 167 AWFEAADGATDQEKSAAIFAAKDAGVGTGPFYLCGFEQGTSMDFCANEHYWRAGADGKPL 226

Query: 227 PYLDRVVFRIIRDPASRAAALETGE---AQYIPLNPVPLSDVARIKASKDLVVETRGFEG 283
           PYLD V F II D A+R   L+ GE   A++IP + V   + A  K   +L   TR    
Sbjct: 227 PYLDGVHFEIIPDDATRILKLQAGEMDAAEFIPFSRVAELE-ADPKIDMNLFPSTRIIYS 285

Query: 284 PAPMYFFDFNLRREPFGDIRVRQAFAHALNRKALAETVFYGLAKPAAGPVPSYQTQFFAT 343
           P        +    P  D RVRQA  +A N+KAL   V  G  KP   P+ +  TQ    
Sbjct: 286 PINTRPTRADGSANPLADARVRQALNYATNKKALIGLVLQGAGKPMTSPLMAAATQLATE 345

Query: 344 DLPQYDYNIAKAEALLDAAGLKKGADGVRLRIDHIPSAYGEDYRRAGEYFKQALKRIGVD 403
             P Y Y++ KA+AL+  AGL  G +     I     A   D        +Q    +G+ 
Sbjct: 346 TDPLYGYDMDKAKALIAEAGLAAGTE-----ITFTTLAGSADDSTIFAALQQMWAPLGIQ 400

Query: 404 VTLRNYDLPTY-IKVVFTEYDFDTHSAWYSAYPDP-QIGVQRRYWSQAIKKGTPSSNASG 461
           + +   D  T   K    E+D  T+  W +   DP Q+     Y+  A   GT      G
Sbjct: 401 LKVEQVDNATRGAKNRSGEFDIHTY-GWVNDVNDPSQVTGWLGYFPTAKAVGT------G 453

Query: 462 IADPEIDAVIERIQTEGNVEKRNADIRELQRLAQVKLPSVNLLELTFYRAYSAKLSGIDL 521
             + + +++ E   TE + + R     E+Q +     P + + E  F  A S  +SG   
Sbjct: 454 WENEKFNSLFEASATEMDADSRAGQYAEMQSIYAEAAPLLFMYETPFAVALSETVSGYVQ 513

Query: 522 APFG 525
            P G
Sbjct: 514 TPLG 517