Pairwise Alignments

Query, 340 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  297 bits (760), Expect = 3e-85
 Identities = 159/315 (50%), Positives = 209/315 (66%), Gaps = 2/315 (0%)

Query: 5   ALLDVKDLTVRFRTPAGRLTAVDRLSFDIAAGETLAIVGESGCGKSVTAMALLRLLRSPP 64
           +LLDVKDL V F T  G +TAV+ L+F +  GETL IVGESG GKS T  A++ LL +  
Sbjct: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLL-AKN 61

Query: 65  AEISGSHVRFEGTELLALSERAMRDVRGNRIAMIFQDPLSALNPVRTVADQIIESLKRHT 124
            +I+GS  +FEG E+L L ER +  VR  +IAMIFQDP+++LNP   V+DQ++E L  H 
Sbjct: 62  GKITGS-AKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120

Query: 125 GLRGPALHRRAVELLDLVRIPEPQRRADDYPHHFSGGMRQRVMIAIAIAANPRLLIADEP 184
           G+        +V +L+ V+IPE ++R   YPH FSGGMRQRVMIA+A+   P+LLIADEP
Sbjct: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180

Query: 185 TTALDVTVQAQILKLIVSLQKEFGMSLLLISHDLGVVAETADRVLVMYAGRKVEERPVAD 244
           TTALDVTVQAQI++L+  L++EF  ++++I+HDLGVVA + D+VLVMYAGR +E   V D
Sbjct: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 245 LFARPLHPYTRALMRARPTPGLRRELLDEIPGIVPSLADLPPGCAFAPRCAHADEACARL 304
           +F  P HPY   L+ A P      E+L  IPG  P+L  LP GC +  RC    + C R 
Sbjct: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300

Query: 305 QPVLEGVGGGGSVAC 319
            P+L   G     AC
Sbjct: 301 APILLPFGNSRQRAC 315