Pairwise Alignments

Query, 340 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

Subject, 333 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  274 bits (700), Expect = 3e-78
 Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 3/300 (1%)

Query: 5   ALLDVKDLTVRFRTPAGRLTAVDRLSFDIAAGETLAIVGESGCGKSVTAMALLRLLRSPP 64
           ALL V++L V        L AV  L F +  GE L IVGESGCGKS+T++AL+ LL    
Sbjct: 2   ALLHVENLRVEIPLGQDTLHAVRGLDFQVERGEMLCIVGESGCGKSLTSLALMDLLPRK- 60

Query: 65  AEISGSHVRFEGTELLALSERAMRDVRGNRIAMIFQDPLSALNPVRTVADQIIESLKRHT 124
           A  + + +  +G ++L  SER M D+RGNR+AMIFQ+P+++LNP  ++ DQ+ E L RH 
Sbjct: 61  ARRTATTLSLDGIDMLTQSERQMCDLRGNRLAMIFQEPMTSLNPAYSIGDQLSEVLTRHR 120

Query: 125 GLRGPALHRRAVELLDLVRIPEPQRRADDYPHHFSGGMRQRVMIAIAIAANPRLLIADEP 184
            +      +RA ++L+ V I     R   YPH  SGG+RQRV+IA+A+   P ++IADEP
Sbjct: 121 KVSRKEALQRAAQMLEKVGISNAGERLRQYPHQLSGGLRQRVIIAMALMCEPDVIIADEP 180

Query: 185 TTALDVTVQAQILKLIVSLQKEFGMSLLLISHDLGVVAETADRVLVMYAGRKVEERPVAD 244
           TTALDVT+QAQIL+LI  +QKE G++++ I+HDLG+VA  ADRV VMYAG+ VE  P  +
Sbjct: 181 TTALDVTIQAQILRLIRDIQKELGLAVIFITHDLGLVARIADRVAVMYAGQIVETAPAIE 240

Query: 245 LFARPLHPYTRALMRARPTPGLRR--ELLDEIPGIVPSLADLPPGCAFAPRCAHADEACA 302
           LF  P HPYTR L+ + P PG  +  + L  IPG+VPSL     GCAF  RC  A  ACA
Sbjct: 241 LFENPQHPYTRGLLASIPIPGRTQPGQPLGSIPGLVPSLVGEQHGCAFRNRCPQAIPACA 300