Pairwise Alignments

Query, 536 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  192 bits (489), Expect = 2e-53
 Identities = 163/522 (31%), Positives = 248/522 (47%), Gaps = 29/522 (5%)

Query: 7   ILRLAAAGASLAAVPMARAADGSPVRGGHLVSIVVPEPQTLG---LTVSNPTIVIAINVY 63
           + R A A A+LA    A A   +      LV   + EPQ+L    +T +N   ++ +NVY
Sbjct: 4   LFRSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRIL-VNVY 62

Query: 64  DGLVTY-DGTGAPRPQLAESYEQAPDGRSITFRLRKGVTWHDGVPFTAADVKYSILEVVK 122
           DGLV + DGT    P LAES++ + DG++ TF LR+GV +HDG  F A  VK++   ++K
Sbjct: 63  DGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLK 122

Query: 123 KTHP-RGIG------TYSQLQDIETPDDHTVILRLAKPSPVIWSALNSSETQILPKHLYE 175
           K HP    G       ++ ++ +   D+HTV  +L++      S L      I+     E
Sbjct: 123 KDHPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVE 182

Query: 176 GTDPLTNPWNTKPIGTGPFIFKEWVRGSHVTLERNPNYWDAGKPYLDRLTFRFVPDAGAR 235
                   +   P GTGPF F EW+    V +ERNP+YWD+    L  + FR + DA  R
Sbjct: 183 KHG---KEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK-LQAVVFRPITDANTR 238

Query: 236 AAALETGEAQYVPLSPVPLSDVERLAKRPDLVVETRGWEAVAPVFFLDFNMRRPQFQDVR 295
            A +  G      +  VP  ++    +  +  V     +A   V+F   N ++  F D R
Sbjct: 239 VAEMMAGGIDV--MVEVPPDNLATFEQDANFAVAE---QAGPHVWFTILNTKQGPFADKR 293

Query: 296 VRRAIALAIDKKALARTVWYGFAEPATGPV-PAFQTAFAATGLPQYDYDPKKAEALLDEA 354
           VR+A   A++K+ L   V  G A  A GP+ PAF   +  + +  Y +DP+KA+ALL EA
Sbjct: 294 VRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFN--WVESSVEPYAHDPEKAKALLAEA 351

Query: 355 GLKRGPDGVRLRFNHVSIPYGD-DFKRSGEFIRQQLKKVGIEVELLNYDLPTFLRKIYTE 413
           G+    +  ++ F       G  D    G  I+  L+ VG +V++  Y+  TFL ++   
Sbjct: 352 GV----ENPQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPG 407

Query: 414 YDFDTLNAYYAAFADPQIGVQRRFWSQTIRPGSAWSNASGYSNPKVDALLEAAAVEPDPQ 473
            +     A  A   +    V          P     N+  YSNP++D LLE A    D  
Sbjct: 408 LEGKADMAEMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEKARRSTDQA 467

Query: 474 KRKALLGEFQLIVQTELPSISLLELKQFRVWSSRLKGVNVGP 515
           +R  L GE Q IV  + P + +   KQ  V ++ +KG  + P
Sbjct: 468 ERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFKLQP 509