Pairwise Alignments

Query, 535 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

Subject, 529 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  174 bits (441), Expect = 7e-48
 Identities = 142/456 (31%), Positives = 208/456 (45%), Gaps = 50/456 (10%)

Query: 63  AVSVNIYDGLVAYD-DNLGLKPALAESWEISPDKLTITFHLRHGVKWHDG------APFT 115
           A S NI+D LV +      ++P LAESWE+SPD  T TFHLR GV +HD         F 
Sbjct: 50  ATSKNIFDKLVLFKRGTTEIEPGLAESWEVSPDGKTYTFHLRKGVTFHDSDIFKPTRQFN 109

Query: 116 SADVRFSALEIWKKVH-----SRGRLTFAE-------LEDVETPDAYTAIFRFRAPSLVV 163
           + DV +S     KK H     S G   + E       LE +E  D YT +F    P   +
Sbjct: 110 ADDVIWSFERQLKKDHPYHAVSGGTYDYFEGMSMNTLLEKIEKVDDYTVVFHLSRPEAPM 169

Query: 164 LSALNAWEGQVLPKHLYENTDILKNPHNVE--PVGTGPFKFKSWTKGEAIELVRNADYWD 221
           L+ L      +      +       P  V+  P+GTGPF F+ + K   I    N  YW 
Sbjct: 170 LANLAMDFASIFSAEYADKMMKAGTPEVVDQKPIGTGPFMFRGYQKDAQIRYEANPTYWQ 229

Query: 222 AGKPYLDRVIYRFIPDGGARAAAIEIGDVGYAAFDPVPFADIERVR--KLPNLKVESRGY 279
            GK  +DR+++   PD   R A ++ G+     + P P AD+E ++  K  NL      +
Sbjct: 230 -GKAAIDRLVFVITPDASVRYAKLKAGECHVMPY-PNP-ADLEAMKTDKAVNLM-----H 281

Query: 280 EWNAKYYFLEFNLRNPILADIRVRRAFAHAIDRQGLADTVWFGLVAPATGPIPSFTKAFY 339
           +      +L +N+      D+RVR+A   AID++ + D V+ G    AT PIP  T   Y
Sbjct: 282 QEGLNVGYLAYNVEKKPFDDVRVRKALNLAIDKKAIIDAVYQGAGTAATNPIPP-TIWSY 340

Query: 340 TADVPTYAFDPKEAERLLDEAGYKRGANGVRFSINQDFQPFNENFRKTAEYIRQNLKRVG 399
              V   AFDP  A++LL EAG K     +     Q  +P+N N R+ AE ++ N K VG
Sbjct: 341 NKAVKDDAFDPAAAKKLLAEAGVKDLKTTIWAMPVQ--RPYNPNARRMAEILQANWKAVG 398

Query: 400 VEVNVRSQDLGAFVRRVYGS------YDFDINTGQFSVFIDPELGLLRQFWSKSIAPGIP 453
           V+  + S + G +++R          + +  + G    F+   LG             IP
Sbjct: 399 VDAEITSYEWGEYLKRAKAGEHETALFGWTGDNGDPDNFLAVLLG----------CDAIP 448

Query: 454 WTNASGYADPGTDKVIEGIKSAADPEQRVALFHELQ 489
             N + + D   + +I+  K A   E+RV L+ E Q
Sbjct: 449 GNNYARWCDKSFENLIQKAKIATSQEERVKLYEEAQ 484