Pairwise Alignments

Query, 535 a.a., Oligopeptide-binding protein AppA from Xanthobacter sp. DMC5

Subject, 534 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score =  342 bits (878), Expect = 2e-98
 Identities = 208/530 (39%), Positives = 291/530 (54%), Gaps = 11/530 (2%)

Query: 8   LFAVAAAFIGLLPAAVLAQTVPSEGTPKRGGTLVTIIQPEPTVLTTTVNNQFSNGAVSVN 67
           L A AAA    LP    AQ  P+   P  GG L   +  E  +L   +        ++  
Sbjct: 14  LLAGAAA----LPRFSWAQGAPA---PVAGGVLTAHLSSEQRILNPALRASTGVYVITSK 66

Query: 68  IYDGLVAYDDNLGLKPALAESWEISPDKLTITFHLRHGVKWHDGAPFTSADVRFSALEIW 127
           I + LV    +    P LA  WE + D  ++TF LR GVKWHDG PFTSADV++SA+E+W
Sbjct: 67  IIESLVDLGPDGAPTPVLATRWEAAADGKSVTFTLREGVKWHDGKPFTSADVQYSAMELW 126

Query: 128 KKVHSRGRLTFAELEDVETPDAYTAIFRF-RAPSLVVLSALNAWEGQVLPKHLYENTDIL 186
           KK  + G      LE V+TPDA TAIFR+ R   L +L    A  G V+P+HL+E T++L
Sbjct: 127 KKHLNYGTQLQRYLEAVDTPDATTAIFRYSRTMPLPLLLRALADLGYVVPRHLFEGTNVL 186

Query: 187 KNPHNVEPVGTGPFKFKSWTKGEAIELVRNADYWDAGKPYLDRVIYRFIPDGGARAAAIE 246
           +NP N  P+GTGPFKF  + +G+ I   RN +YW  G+PYLDRV++RFI D  A +AA+E
Sbjct: 187 ENPANTAPIGTGPFKFVEYQRGQYIVAERNPEYWRKGEPYLDRVVWRFITDKSAASAALE 246

Query: 247 IGDVGYAAFDPVPFADIERVRKLPNLKVESRGYEWNAKYYFLEFNLRNPILADIRVRRAF 306
            G V  +A+  +  +DIER+ K    +V SRG E N+    +EFN R   LAD+RVRRA 
Sbjct: 247 TGQVQISAYTQLALSDIERLAKDSRFEVSSRGNEANSFNNTVEFNHRRKELADVRVRRAI 306

Query: 307 AHAIDRQGLADTVWFGLVAPATGPIPSFTKAFYTADVPTYAFDPKEAERLLDEAGYKRGA 366
           AHA+D     +   +G    ATG IPS ++AFY      Y FD K+AE LLDEAGY R  
Sbjct: 307 AHAVDVDFFVENFLYGRGKRATGFIPSISQAFYPGGAFPYPFDTKKAEALLDEAGYPRQK 366

Query: 367 NGVRFSINQDFQPFNENFRKTAEYIRQNLKRVGVEVNVRSQDLGAFVRRVYGSYDFDINT 426
            G RFS+        E+  + A +++Q+L  VG++V +   D+   +  +Y  ++FD+ T
Sbjct: 367 GGERFSLRLLPILNGEDVPQFATFLQQSLAEVGIKVEIVQLDVAGALSAIYKDWNFDLAT 426

Query: 427 GQFSVFIDPELGLLRQFWSKSIAP-GIPWTNASGYADPGTDKVIEGIKSAADPEQRVALF 485
           G      DP +      W +S +P G PWTN  G+     D +I+   +  DP +R AL+
Sbjct: 427 GWHQYRGDPAVS--TTVWFRSGSPKGAPWTNQFGWESAEVDTLIDDAAAEIDPVKRKALY 484

Query: 486 HELQRRVQRDLPVLPLLELKQFTVYNTNVRGVSVRPDGAMSSLKDIWLAE 535
            +L   +  +LPV    E +  +V N  V+     P    S   D W+A+
Sbjct: 485 AQLVDVINEELPVWFATERQFVSVTNKVVQNHHNIPRWPSSDWHDTWIAK 534