Pairwise Alignments

Query, 400 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 382 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 43/237 (18%)

Query: 44  APVRIGYLPITDATPLLVA---------------------HANGLFEAEGLKAEKPVL-- 80
           A +++ YLP     PL VA                         L+E + L A    +  
Sbjct: 33  ADLKVAYLPSDHDAPLFVAAEYPNVFKDEYGVYLQEVENKKTYELYENDKLVANVEFIKV 92

Query: 81  LRSWAQVIEAFISGQVNVIHLLSPMTVWARFGSGAPARVVAWNHVSGSALTVSPDISSV- 139
           +   A+++     GQV+V     P  V++    G  A++V+     GSA+ +  DI +  
Sbjct: 93  IEGGAKIMTLMAQGQVDVGLNGVPPAVFS-IDQGTNAKIVSPAQSEGSAIVIRSDIPAET 151

Query: 140 -----------ADLGGKT-VAVPFWYSIHNVVVQNLLRENGLTPVTKKTGTPAANEVNLV 187
                      AD G +  +  P   SI  V++++ L   G+T         A  ++ + 
Sbjct: 152 WDEFVVYIKEQADSGVQLKIGHPLPTSIQYVMIKSALDTEGITYTENPNDKDAMVQL-IN 210

Query: 188 VMAPADMPPALATRQVAGYIVAEPFNAVAEAQGIGKILRFTGDV-----WKDHACCV 239
                 MP  L++ ++   I  EP        GIGK + ++GD+     W +H CCV
Sbjct: 211 CKGQGTMPQLLSSNELDAVIAWEPTPEQLAVLGIGKSVIYSGDIPPAGMWVNHPCCV 267